Hb_034661_020

Information

Type -
Description -
Location Contig34661: 10842-12596
Sequence    

Annotation

kegg
ID rcu:RCOM_1592840
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID KDP38427.1
description hypothetical protein JCGZ_04352 [Jatropha curcas]
swissprot
ID O49858
description Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1
trembl
ID A0A067KQL1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04352 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034661_020 0.0 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
2 Hb_000002_200 0.0519630734 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096 [Brassica rapa]
3 Hb_001627_030 0.1001241622 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
4 Hb_147793_010 0.1072055429 - - PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Jatropha curcas]
5 Hb_000111_020 0.1126703505 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
6 Hb_096292_010 0.1209786987 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
7 Hb_185736_010 0.1556355273 - - -
8 Hb_007273_010 0.1650019916 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
9 Hb_187134_010 0.1716842554 - - -
10 Hb_000002_170 0.1729904182 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
11 Hb_002391_330 0.1743880011 - - conserved hypothetical protein [Ricinus communis]
12 Hb_023661_060 0.1906744372 - - PREDICTED: uncharacterized protein LOC104886268, partial [Beta vulgaris subsp. vulgaris]
13 Hb_041405_010 0.1921131217 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Glycine max]
14 Hb_006277_070 0.1984013249 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000016_070 0.2135455615 transcription factor TF Family: M-type PREDICTED: MADS-box protein SOC1-like, partial [Nicotiana sylvestris]
16 Hb_000019_020 0.2135455615 - - hypothetical protein POPTR_0017s08820g, partial [Populus trichocarpa]
17 Hb_000019_160 0.2135455615 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]
18 Hb_000029_230 0.2135455615 - - hypothetical protein ARALYDRAFT_496947 [Arabidopsis lyrata subsp. lyrata]
19 Hb_000032_170 0.2135455615 - - -
20 Hb_000042_170 0.2135455615 transcription factor TF Family: ULT Protein ULTRAPETALA2, putative [Ricinus communis]

Gene co-expression network

sample Hb_034661_020 Hb_034661_020 Hb_000002_200 Hb_000002_200 Hb_034661_020--Hb_000002_200 Hb_001627_030 Hb_001627_030 Hb_034661_020--Hb_001627_030 Hb_147793_010 Hb_147793_010 Hb_034661_020--Hb_147793_010 Hb_000111_020 Hb_000111_020 Hb_034661_020--Hb_000111_020 Hb_096292_010 Hb_096292_010 Hb_034661_020--Hb_096292_010 Hb_185736_010 Hb_185736_010 Hb_034661_020--Hb_185736_010 Hb_000002_200--Hb_001627_030 Hb_000002_200--Hb_000111_020 Hb_000002_200--Hb_147793_010 Hb_000002_200--Hb_096292_010 Hb_000002_200--Hb_185736_010 Hb_001627_030--Hb_000111_020 Hb_001627_030--Hb_185736_010 Hb_007273_010 Hb_007273_010 Hb_001627_030--Hb_007273_010 Hb_001627_030--Hb_096292_010 Hb_147793_010--Hb_001627_030 Hb_147793_010--Hb_000111_020 Hb_147793_010--Hb_096292_010 Hb_147793_010--Hb_185736_010 Hb_000111_020--Hb_185736_010 Hb_000111_020--Hb_007273_010 Hb_187134_010 Hb_187134_010 Hb_000111_020--Hb_187134_010 Hb_000111_020--Hb_096292_010 Hb_096292_010--Hb_185736_010 Hb_096292_010--Hb_007273_010 Hb_096292_010--Hb_187134_010 Hb_185736_010--Hb_007273_010 Hb_185736_010--Hb_187134_010 Hb_011016_040 Hb_011016_040 Hb_185736_010--Hb_011016_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0134926 0 0 0 0 0.013487
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.092201 12.1379 0.0909036 0.964954 0

CAGE analysis