Hb_187134_010

Information

Type -
Description -
Location Contig187134: 3-380
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187134_010 0.0 - - -
2 Hb_007273_010 0.0080897919 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
3 Hb_185736_010 0.0196388594 - - -
4 Hb_000111_020 0.0791453613 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
5 Hb_011016_040 0.0961191145 - - calcium-dependent protein kinase, putative [Ricinus communis]
6 Hb_000143_040 0.096143596 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
7 Hb_000258_190 0.0967090086 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
8 Hb_096292_010 0.096891959 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
9 Hb_003388_090 0.0971915976 - - putative beta-D-xylosidase 5 -like protein [Gossypium arboreum]
10 Hb_000265_180 0.0980587764 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
11 Hb_004881_110 0.0998648245 - - -
12 Hb_001369_330 0.0999376684 - - conserved hypothetical protein [Ricinus communis]
13 Hb_010120_010 0.1005962954 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
14 Hb_010267_010 0.1014805491 - - -
15 Hb_001627_030 0.102431723 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
16 Hb_035492_010 0.1223881206 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
17 Hb_000635_120 0.1259180289 - - -
18 Hb_001999_110 0.1260332641 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
19 Hb_011457_060 0.127041434 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]
20 Hb_012368_060 0.1274527522 - - -

Gene co-expression network

sample Hb_187134_010 Hb_187134_010 Hb_007273_010 Hb_007273_010 Hb_187134_010--Hb_007273_010 Hb_185736_010 Hb_185736_010 Hb_187134_010--Hb_185736_010 Hb_000111_020 Hb_000111_020 Hb_187134_010--Hb_000111_020 Hb_011016_040 Hb_011016_040 Hb_187134_010--Hb_011016_040 Hb_000143_040 Hb_000143_040 Hb_187134_010--Hb_000143_040 Hb_000258_190 Hb_000258_190 Hb_187134_010--Hb_000258_190 Hb_007273_010--Hb_185736_010 Hb_007273_010--Hb_000111_020 Hb_096292_010 Hb_096292_010 Hb_007273_010--Hb_096292_010 Hb_001627_030 Hb_001627_030 Hb_007273_010--Hb_001627_030 Hb_007273_010--Hb_011016_040 Hb_185736_010--Hb_000111_020 Hb_185736_010--Hb_001627_030 Hb_185736_010--Hb_096292_010 Hb_185736_010--Hb_011016_040 Hb_000111_020--Hb_001627_030 Hb_000002_200 Hb_000002_200 Hb_000111_020--Hb_000002_200 Hb_000111_020--Hb_096292_010 Hb_011016_040--Hb_000143_040 Hb_011016_040--Hb_000258_190 Hb_003388_090 Hb_003388_090 Hb_011016_040--Hb_003388_090 Hb_000265_180 Hb_000265_180 Hb_011016_040--Hb_000265_180 Hb_004881_110 Hb_004881_110 Hb_011016_040--Hb_004881_110 Hb_001369_330 Hb_001369_330 Hb_011016_040--Hb_001369_330 Hb_000143_040--Hb_000258_190 Hb_000143_040--Hb_003388_090 Hb_000143_040--Hb_000265_180 Hb_000143_040--Hb_004881_110 Hb_000143_040--Hb_001369_330 Hb_000258_190--Hb_003388_090 Hb_000258_190--Hb_000265_180 Hb_000258_190--Hb_004881_110 Hb_000258_190--Hb_001369_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.737227 0 0.172018 0

CAGE analysis