Hb_000265_180

Information

Type -
Description -
Location Contig265: 233166-234080
Sequence    

Annotation

kegg
ID tcc:TCM_007027
description Alpha/beta-Hydrolases superfamily protein, putative
nr
ID XP_007042380.1
description Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
swissprot
ID Q9SMM9
description Probable carboxylesterase 13 OS=Arabidopsis thaliana GN=CXE13 PE=1 SV=1
trembl
ID A0A061E1M8
description Alpha/beta-Hydrolases superfamily protein, putative OS=Theobroma cacao GN=TCM_007027 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000265_180 0.0 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
2 Hb_003388_090 0.0008719191 - - putative beta-D-xylosidase 5 -like protein [Gossypium arboreum]
3 Hb_000258_190 0.0013571145 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
4 Hb_004881_110 0.0018161543 - - -
5 Hb_001369_330 0.0018894125 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000143_040 0.0019255519 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
7 Hb_011016_040 0.0019501636 - - calcium-dependent protein kinase, putative [Ricinus communis]
8 Hb_010120_010 0.0025518077 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
9 Hb_010267_010 0.003441186 - - -
10 Hb_035492_010 0.0244910897 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
11 Hb_000635_120 0.0280488967 - - -
12 Hb_001999_110 0.0281650609 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
13 Hb_011457_060 0.0291814069 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]
14 Hb_012368_060 0.0295960859 - - -
15 Hb_187134_010 0.0980587764 - - -
16 Hb_007273_010 0.1060921391 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
17 Hb_185736_010 0.1175429872 - - -
18 Hb_083103_030 0.1370060839 - - putative retrotransposon protein [Malus domestica]
19 Hb_103832_030 0.1408174964 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
20 Hb_172503_010 0.141609166 - - PREDICTED: uncharacterized protein LOC105647154 [Jatropha curcas]

Gene co-expression network

sample Hb_000265_180 Hb_000265_180 Hb_003388_090 Hb_003388_090 Hb_000265_180--Hb_003388_090 Hb_000258_190 Hb_000258_190 Hb_000265_180--Hb_000258_190 Hb_004881_110 Hb_004881_110 Hb_000265_180--Hb_004881_110 Hb_001369_330 Hb_001369_330 Hb_000265_180--Hb_001369_330 Hb_000143_040 Hb_000143_040 Hb_000265_180--Hb_000143_040 Hb_011016_040 Hb_011016_040 Hb_000265_180--Hb_011016_040 Hb_003388_090--Hb_000258_190 Hb_003388_090--Hb_000143_040 Hb_003388_090--Hb_011016_040 Hb_003388_090--Hb_004881_110 Hb_003388_090--Hb_001369_330 Hb_000258_190--Hb_000143_040 Hb_000258_190--Hb_011016_040 Hb_000258_190--Hb_004881_110 Hb_000258_190--Hb_001369_330 Hb_004881_110--Hb_001369_330 Hb_010120_010 Hb_010120_010 Hb_004881_110--Hb_010120_010 Hb_010267_010 Hb_010267_010 Hb_004881_110--Hb_010267_010 Hb_001369_330--Hb_010120_010 Hb_001369_330--Hb_010267_010 Hb_000143_040--Hb_011016_040 Hb_000143_040--Hb_004881_110 Hb_000143_040--Hb_001369_330 Hb_011016_040--Hb_004881_110 Hb_011016_040--Hb_001369_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0445715 0 0.0179657 0

CAGE analysis