Hb_001627_030

Information

Type -
Description -
Location Contig1627: 56519-56866
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP31376.1
description hypothetical protein JCGZ_11752 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K572
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11752 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001627_030 0.0 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
2 Hb_000111_020 0.023499885 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
3 Hb_000002_200 0.065387122 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096 [Brassica rapa]
4 Hb_185736_010 0.0829577371 - - -
5 Hb_007273_010 0.0944174215 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
6 Hb_096292_010 0.0973772417 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
7 Hb_034661_020 0.1001241622 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
8 Hb_147793_010 0.1023674891 - - PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Jatropha curcas]
9 Hb_187134_010 0.102431723 - - -
10 Hb_041405_010 0.182498812 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Glycine max]
11 Hb_011016_040 0.1970209255 - - calcium-dependent protein kinase, putative [Ricinus communis]
12 Hb_000143_040 0.1970448998 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
13 Hb_000258_190 0.1975985846 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_003388_090 0.1980711437 - - putative beta-D-xylosidase 5 -like protein [Gossypium arboreum]
15 Hb_000265_180 0.1989202531 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
16 Hb_004881_110 0.2006884797 - - -
17 Hb_001369_330 0.2007597928 - - conserved hypothetical protein [Ricinus communis]
18 Hb_010120_010 0.2014045602 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
19 Hb_010267_010 0.2022701538 - - -
20 Hb_002391_330 0.2027097767 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001627_030 Hb_001627_030 Hb_000111_020 Hb_000111_020 Hb_001627_030--Hb_000111_020 Hb_000002_200 Hb_000002_200 Hb_001627_030--Hb_000002_200 Hb_185736_010 Hb_185736_010 Hb_001627_030--Hb_185736_010 Hb_007273_010 Hb_007273_010 Hb_001627_030--Hb_007273_010 Hb_096292_010 Hb_096292_010 Hb_001627_030--Hb_096292_010 Hb_034661_020 Hb_034661_020 Hb_001627_030--Hb_034661_020 Hb_000111_020--Hb_185736_010 Hb_000111_020--Hb_007273_010 Hb_187134_010 Hb_187134_010 Hb_000111_020--Hb_187134_010 Hb_000111_020--Hb_000002_200 Hb_000111_020--Hb_096292_010 Hb_000002_200--Hb_034661_020 Hb_147793_010 Hb_147793_010 Hb_000002_200--Hb_147793_010 Hb_000002_200--Hb_096292_010 Hb_000002_200--Hb_185736_010 Hb_185736_010--Hb_007273_010 Hb_185736_010--Hb_187134_010 Hb_185736_010--Hb_096292_010 Hb_011016_040 Hb_011016_040 Hb_185736_010--Hb_011016_040 Hb_007273_010--Hb_187134_010 Hb_007273_010--Hb_096292_010 Hb_007273_010--Hb_011016_040 Hb_096292_010--Hb_187134_010 Hb_034661_020--Hb_147793_010 Hb_034661_020--Hb_000111_020 Hb_034661_020--Hb_096292_010 Hb_034661_020--Hb_185736_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 4.05213 0 0.472115 0

CAGE analysis