Hb_051067_010

Information

Type -
Description -
Location Contig51067: 195-3508
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0000166
description protein kinase chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_051067_010 0.0 - - -
2 Hb_006277_070 0.1745074955 - - conserved hypothetical protein [Ricinus communis]
3 Hb_147793_010 0.2039247016 - - PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Jatropha curcas]
4 Hb_015057_030 0.2040193766 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-52, partial [Jatropha curcas]
5 Hb_023661_060 0.2085305433 - - PREDICTED: uncharacterized protein LOC104886268, partial [Beta vulgaris subsp. vulgaris]
6 Hb_000002_170 0.2088779734 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
7 Hb_034661_020 0.2235860007 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
8 Hb_000164_060 0.2255427709 - - -
9 Hb_012573_010 0.2290858596 - - PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
10 Hb_000002_200 0.2300949399 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096 [Brassica rapa]
11 Hb_002890_080 0.2417499741 - - conserved hypothetical protein [Ricinus communis]
12 Hb_096292_010 0.2452598003 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
13 Hb_006469_120 0.248355443 - - hypothetical protein POPTR_0005s16430g [Populus trichocarpa]
14 Hb_000062_300 0.2487987464 - - PREDICTED: uncharacterized protein LOC105644761 [Jatropha curcas]
15 Hb_003732_040 0.2502756692 - - putative esterase family protein [Populus trichocarpa]
16 Hb_000962_080 0.2543317531 - - PREDICTED: uncharacterized protein LOC105131773 [Populus euphratica]
17 Hb_001627_030 0.2551653413 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
18 Hb_014497_080 0.2612706976 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
19 Hb_002391_330 0.2632644242 - - conserved hypothetical protein [Ricinus communis]
20 Hb_042871_010 0.263319381 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]

Gene co-expression network

sample Hb_051067_010 Hb_051067_010 Hb_006277_070 Hb_006277_070 Hb_051067_010--Hb_006277_070 Hb_147793_010 Hb_147793_010 Hb_051067_010--Hb_147793_010 Hb_015057_030 Hb_015057_030 Hb_051067_010--Hb_015057_030 Hb_023661_060 Hb_023661_060 Hb_051067_010--Hb_023661_060 Hb_000002_170 Hb_000002_170 Hb_051067_010--Hb_000002_170 Hb_034661_020 Hb_034661_020 Hb_051067_010--Hb_034661_020 Hb_006277_070--Hb_000002_170 Hb_012573_010 Hb_012573_010 Hb_006277_070--Hb_012573_010 Hb_003732_040 Hb_003732_040 Hb_006277_070--Hb_003732_040 Hb_002391_330 Hb_002391_330 Hb_006277_070--Hb_002391_330 Hb_006277_070--Hb_015057_030 Hb_000002_200 Hb_000002_200 Hb_147793_010--Hb_000002_200 Hb_001627_030 Hb_001627_030 Hb_147793_010--Hb_001627_030 Hb_147793_010--Hb_034661_020 Hb_000111_020 Hb_000111_020 Hb_147793_010--Hb_000111_020 Hb_096292_010 Hb_096292_010 Hb_147793_010--Hb_096292_010 Hb_185736_010 Hb_185736_010 Hb_147793_010--Hb_185736_010 Hb_001892_090 Hb_001892_090 Hb_015057_030--Hb_001892_090 Hb_000622_070 Hb_000622_070 Hb_015057_030--Hb_000622_070 Hb_002890_080 Hb_002890_080 Hb_015057_030--Hb_002890_080 Hb_000016_070 Hb_000016_070 Hb_015057_030--Hb_000016_070 Hb_000962_080 Hb_000962_080 Hb_023661_060--Hb_000962_080 Hb_023661_060--Hb_000002_170 Hb_023661_060--Hb_000016_070 Hb_000019_020 Hb_000019_020 Hb_023661_060--Hb_000019_020 Hb_000019_160 Hb_000019_160 Hb_023661_060--Hb_000019_160 Hb_000029_230 Hb_000029_230 Hb_023661_060--Hb_000029_230 Hb_000002_170--Hb_002391_330 Hb_000002_170--Hb_034661_020 Hb_000002_170--Hb_012573_010 Hb_000002_170--Hb_000962_080 Hb_034661_020--Hb_000002_200 Hb_034661_020--Hb_001627_030 Hb_034661_020--Hb_000111_020 Hb_034661_020--Hb_096292_010 Hb_034661_020--Hb_185736_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0109146 0.0587933 0 0.0148405
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.02502 0.0492651 0.0524984 0

CAGE analysis