Hb_000045_210

Information

Type -
Description -
Location Contig45: 199908-201398
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000045_210 0.0 - - -
2 Hb_141194_010 0.1179853321 - - PREDICTED: protein ZINC INDUCED FACILITATOR 1-like isoform X2 [Populus euphratica]
3 Hb_044653_060 0.12204481 - - PREDICTED: uncharacterized protein LOC105628750 [Jatropha curcas]
4 Hb_027892_040 0.1286470498 - - PREDICTED: proteasome subunit alpha type-6 [Jatropha curcas]
5 Hb_001266_030 0.1331068793 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Jatropha curcas]
6 Hb_012053_010 0.1439619911 - - srpk, putative [Ricinus communis]
7 Hb_000431_160 0.1526944247 - - PREDICTED: protein transport protein Sec61 subunit gamma-like [Jatropha curcas]
8 Hb_003007_010 0.1631196902 - - PREDICTED: probable peptide/nitrate transporter At3g43790 isoform X1 [Populus euphratica]
9 Hb_000258_180 0.1714765665 - - PREDICTED: glutathione S-transferase U10-like [Vitis vinifera]
10 Hb_000103_550 0.1738851057 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 2 isoform X1 [Jatropha curcas]
11 Hb_003226_240 0.1798058454 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
12 Hb_000617_110 0.1801669579 - - translationally controlled tumor protein [Hevea brasiliensis]
13 Hb_004545_130 0.1825512108 - - uncharacterized protein LOC100305465 [Glycine max]
14 Hb_001396_090 0.1834019126 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Jatropha curcas]
15 Hb_004100_090 0.1837550122 - - RecName: Full=Profilin-6; AltName: Full=Pollen allergen Hev b 8.0204; AltName: Allergen=Hev b 8.0204 [Hevea brasiliensis]
16 Hb_086692_020 0.1858262973 - - PREDICTED: protein kinase APK1B, chloroplastic-like [Jatropha curcas]
17 Hb_001433_100 0.1870795372 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
18 Hb_000592_060 0.1871269822 - - PREDICTED: ras-related protein RABA6a [Populus euphratica]
19 Hb_000012_070 0.1897361789 - - cytochrome P450, putative [Ricinus communis]
20 Hb_003540_200 0.1907632917 - - PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Jatropha curcas]

Gene co-expression network

sample Hb_000045_210 Hb_000045_210 Hb_141194_010 Hb_141194_010 Hb_000045_210--Hb_141194_010 Hb_044653_060 Hb_044653_060 Hb_000045_210--Hb_044653_060 Hb_027892_040 Hb_027892_040 Hb_000045_210--Hb_027892_040 Hb_001266_030 Hb_001266_030 Hb_000045_210--Hb_001266_030 Hb_012053_010 Hb_012053_010 Hb_000045_210--Hb_012053_010 Hb_000431_160 Hb_000431_160 Hb_000045_210--Hb_000431_160 Hb_034482_040 Hb_034482_040 Hb_141194_010--Hb_034482_040 Hb_003007_010 Hb_003007_010 Hb_141194_010--Hb_003007_010 Hb_003226_240 Hb_003226_240 Hb_141194_010--Hb_003226_240 Hb_001143_070 Hb_001143_070 Hb_141194_010--Hb_001143_070 Hb_000592_060 Hb_000592_060 Hb_141194_010--Hb_000592_060 Hb_044653_060--Hb_000431_160 Hb_044653_060--Hb_001266_030 Hb_000617_110 Hb_000617_110 Hb_044653_060--Hb_000617_110 Hb_000879_210 Hb_000879_210 Hb_044653_060--Hb_000879_210 Hb_004545_130 Hb_004545_130 Hb_044653_060--Hb_004545_130 Hb_027892_040--Hb_012053_010 Hb_027892_040--Hb_001266_030 Hb_027892_040--Hb_044653_060 Hb_027892_040--Hb_000431_160 Hb_000316_100 Hb_000316_100 Hb_027892_040--Hb_000316_100 Hb_001266_030--Hb_012053_010 Hb_001266_030--Hb_000431_160 Hb_001266_030--Hb_000617_110 Hb_002105_030 Hb_002105_030 Hb_012053_010--Hb_002105_030 Hb_002344_070 Hb_002344_070 Hb_012053_010--Hb_002344_070 Hb_000878_020 Hb_000878_020 Hb_012053_010--Hb_000878_020 Hb_003540_200 Hb_003540_200 Hb_012053_010--Hb_003540_200 Hb_000110_170 Hb_000110_170 Hb_012053_010--Hb_000110_170 Hb_000431_160--Hb_000617_110 Hb_000431_160--Hb_004545_130 Hb_000431_160--Hb_000879_210 Hb_004735_050 Hb_004735_050 Hb_000431_160--Hb_004735_050 Hb_000819_070 Hb_000819_070 Hb_000431_160--Hb_000819_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.356483 0.0887268 1.06268 1.14445 0.513872 0.223676
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.27865 23.0736 5.84296 1.77838 0.662604

CAGE analysis