Hb_000819_070

Information

Type -
Description -
Location Contig819: 113668-120204
Sequence    

Annotation

kegg
ID pop:POPTR_0002s01130g
description POPTRDRAFT_709812; dolichyl-phosphate beta-D-mannosyltransferase family protein
nr
ID XP_012073661.1
description PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas]
swissprot
ID Q9VIU7
description Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG10166 PE=3 SV=1
trembl
ID A0A067KL12
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08088 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000819_070 0.0 - - PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas]
2 Hb_004223_260 0.0863519553 - - hypothetical protein F383_09277 [Gossypium arboreum]
3 Hb_000617_110 0.0988839968 - - translationally controlled tumor protein [Hevea brasiliensis]
4 Hb_001369_400 0.1004549612 - - PREDICTED: uncharacterized protein LOC105648609 [Jatropha curcas]
5 Hb_003349_070 0.102603015 - - PREDICTED: signal recognition particle 14 kDa protein [Gossypium raimondii]
6 Hb_000780_210 0.1121065707 - - PREDICTED: transmembrane protein 256 homolog [Jatropha curcas]
7 Hb_000635_080 0.1121412883 - - 60S ribosomal protein L17A [Hevea brasiliensis]
8 Hb_000431_160 0.1206219176 - - PREDICTED: protein transport protein Sec61 subunit gamma-like [Jatropha curcas]
9 Hb_000106_100 0.1226767422 - - -
10 Hb_004545_130 0.1238531239 - - uncharacterized protein LOC100305465 [Glycine max]
11 Hb_000318_490 0.1256976706 - - PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Jatropha curcas]
12 Hb_001377_380 0.1272804023 - - PREDICTED: uncharacterized protein LOC105642831 [Jatropha curcas]
13 Hb_004635_060 0.1313543309 - - hypothetical protein POPTR_0006s22850g [Populus trichocarpa]
14 Hb_000281_230 0.1316409264 - - PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X2 [Jatropha curcas]
15 Hb_000613_170 0.1361381975 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
16 Hb_000879_210 0.1371640087 - - hypothetical protein POPTR_0014s01620g [Populus trichocarpa]
17 Hb_001434_070 0.1406824081 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Jatropha curcas]
18 Hb_001159_200 0.1413210961 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Jatropha curcas]
19 Hb_030565_040 0.1420396192 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
20 Hb_034585_050 0.1427216319 - - -

Gene co-expression network

sample Hb_000819_070 Hb_000819_070 Hb_004223_260 Hb_004223_260 Hb_000819_070--Hb_004223_260 Hb_000617_110 Hb_000617_110 Hb_000819_070--Hb_000617_110 Hb_001369_400 Hb_001369_400 Hb_000819_070--Hb_001369_400 Hb_003349_070 Hb_003349_070 Hb_000819_070--Hb_003349_070 Hb_000780_210 Hb_000780_210 Hb_000819_070--Hb_000780_210 Hb_000635_080 Hb_000635_080 Hb_000819_070--Hb_000635_080 Hb_004223_260--Hb_003349_070 Hb_000106_100 Hb_000106_100 Hb_004223_260--Hb_000106_100 Hb_004223_260--Hb_000780_210 Hb_006718_010 Hb_006718_010 Hb_004223_260--Hb_006718_010 Hb_001623_430 Hb_001623_430 Hb_004223_260--Hb_001623_430 Hb_000431_160 Hb_000431_160 Hb_000617_110--Hb_000431_160 Hb_004545_130 Hb_004545_130 Hb_000617_110--Hb_004545_130 Hb_044653_060 Hb_044653_060 Hb_000617_110--Hb_044653_060 Hb_000879_210 Hb_000879_210 Hb_000617_110--Hb_000879_210 Hb_000617_110--Hb_000635_080 Hb_002876_370 Hb_002876_370 Hb_001369_400--Hb_002876_370 Hb_001159_200 Hb_001159_200 Hb_001369_400--Hb_001159_200 Hb_000318_490 Hb_000318_490 Hb_001369_400--Hb_000318_490 Hb_000976_250 Hb_000976_250 Hb_001369_400--Hb_000976_250 Hb_034585_050 Hb_034585_050 Hb_001369_400--Hb_034585_050 Hb_003349_070--Hb_001623_430 Hb_003349_070--Hb_000106_100 Hb_000085_330 Hb_000085_330 Hb_003349_070--Hb_000085_330 Hb_183086_040 Hb_183086_040 Hb_003349_070--Hb_183086_040 Hb_001377_380 Hb_001377_380 Hb_000780_210--Hb_001377_380 Hb_000780_210--Hb_000635_080 Hb_000780_210--Hb_183086_040 Hb_000820_130 Hb_000820_130 Hb_000780_210--Hb_000820_130 Hb_002316_120 Hb_002316_120 Hb_000780_210--Hb_002316_120 Hb_012539_020 Hb_012539_020 Hb_000780_210--Hb_012539_020 Hb_000635_080--Hb_001377_380 Hb_002248_100 Hb_002248_100 Hb_000635_080--Hb_002248_100 Hb_006588_080 Hb_006588_080 Hb_000635_080--Hb_006588_080 Hb_000635_080--Hb_004545_130 Hb_000635_080--Hb_002316_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.857835 0.120493 0.0952221 0.763399 1.08555 1.93948
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.30783 13.0688 3.65271 2.03253 0.900443

CAGE analysis