Hb_005725_100

Information

Type -
Description -
Location Contig5725: 35743-36087
Sequence    

Annotation

kegg
ID pop:POPTR_0014s01410g
description POPTRDRAFT_823861; hypothetical protein
nr
ID ADR71308.1
description hypothetical protein 30 [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID I3NMS1
description Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005725_100 0.0 - - hypothetical protein 30 [Hevea brasiliensis]
2 Hb_004429_110 0.1589987752 - - PREDICTED: protein SPIRAL1-like 1 [Populus euphratica]
3 Hb_000239_110 0.1679843974 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
4 Hb_183612_080 0.1736503083 - - hypothetical protein POPTR_0001s00500g [Populus trichocarpa]
5 Hb_001266_030 0.1824477406 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Jatropha curcas]
6 Hb_000879_210 0.1875653633 - - hypothetical protein POPTR_0014s01620g [Populus trichocarpa]
7 Hb_000617_110 0.1884173174 - - translationally controlled tumor protein [Hevea brasiliensis]
8 Hb_004735_050 0.1909905235 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
9 Hb_000500_210 0.1944043157 - - -
10 Hb_000431_160 0.1996167421 - - PREDICTED: protein transport protein Sec61 subunit gamma-like [Jatropha curcas]
11 Hb_003702_080 0.2015213181 - - cysteine protease, putative [Ricinus communis]
12 Hb_100180_010 0.2063618071 - - PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
13 Hb_003398_020 0.206871867 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
14 Hb_000613_170 0.2073065759 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
15 Hb_044653_060 0.2084368646 - - PREDICTED: uncharacterized protein LOC105628750 [Jatropha curcas]
16 Hb_005245_070 0.2100504864 - - PREDICTED: uncharacterized protein LOC105643658 [Jatropha curcas]
17 Hb_001140_240 0.211213681 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_005054_040 0.2139433406 - - PREDICTED: 60S ribosomal protein L35a-1 [Gossypium raimondii]
19 Hb_004545_130 0.2149316286 - - uncharacterized protein LOC100305465 [Glycine max]
20 Hb_000692_020 0.2188595122 - - PREDICTED: E3 ubiquitin-protein ligase ATL23 [Jatropha curcas]

Gene co-expression network

sample Hb_005725_100 Hb_005725_100 Hb_004429_110 Hb_004429_110 Hb_005725_100--Hb_004429_110 Hb_000239_110 Hb_000239_110 Hb_005725_100--Hb_000239_110 Hb_183612_080 Hb_183612_080 Hb_005725_100--Hb_183612_080 Hb_001266_030 Hb_001266_030 Hb_005725_100--Hb_001266_030 Hb_000879_210 Hb_000879_210 Hb_005725_100--Hb_000879_210 Hb_000617_110 Hb_000617_110 Hb_005725_100--Hb_000617_110 Hb_000454_180 Hb_000454_180 Hb_004429_110--Hb_000454_180 Hb_004735_050 Hb_004735_050 Hb_004429_110--Hb_004735_050 Hb_006588_080 Hb_006588_080 Hb_004429_110--Hb_006588_080 Hb_004429_110--Hb_000617_110 Hb_001105_090 Hb_001105_090 Hb_004429_110--Hb_001105_090 Hb_000635_080 Hb_000635_080 Hb_004429_110--Hb_000635_080 Hb_003398_020 Hb_003398_020 Hb_000239_110--Hb_003398_020 Hb_042871_010 Hb_042871_010 Hb_000239_110--Hb_042871_010 Hb_003376_380 Hb_003376_380 Hb_000239_110--Hb_003376_380 Hb_000239_110--Hb_004429_110 Hb_000500_210 Hb_000500_210 Hb_000239_110--Hb_000500_210 Hb_183612_080--Hb_000617_110 Hb_000270_730 Hb_000270_730 Hb_183612_080--Hb_000270_730 Hb_001842_120 Hb_001842_120 Hb_183612_080--Hb_001842_120 Hb_001842_080 Hb_001842_080 Hb_183612_080--Hb_001842_080 Hb_004159_050 Hb_004159_050 Hb_183612_080--Hb_004159_050 Hb_000613_170 Hb_000613_170 Hb_183612_080--Hb_000613_170 Hb_044653_060 Hb_044653_060 Hb_001266_030--Hb_044653_060 Hb_012053_010 Hb_012053_010 Hb_001266_030--Hb_012053_010 Hb_000045_210 Hb_000045_210 Hb_001266_030--Hb_000045_210 Hb_027892_040 Hb_027892_040 Hb_001266_030--Hb_027892_040 Hb_000431_160 Hb_000431_160 Hb_001266_030--Hb_000431_160 Hb_001266_030--Hb_000617_110 Hb_000879_210--Hb_000431_160 Hb_000879_210--Hb_000617_110 Hb_000879_210--Hb_044653_060 Hb_004545_130 Hb_004545_130 Hb_000879_210--Hb_004545_130 Hb_000819_070 Hb_000819_070 Hb_000879_210--Hb_000819_070 Hb_008748_020 Hb_008748_020 Hb_000879_210--Hb_008748_020 Hb_000617_110--Hb_000431_160 Hb_000617_110--Hb_004545_130 Hb_000617_110--Hb_000819_070 Hb_000617_110--Hb_044653_060 Hb_000617_110--Hb_000635_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.77122 2.85239 0 8.09534 0.641851 2.69602
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.8004 55.1165 5.79128 5.7633 0.351631

CAGE analysis