Hb_067034_020

Information

Type -
Description -
Location Contig67034: 11024-12157
Sequence    

Annotation

kegg
ID rcu:RCOM_0612220
description hypothetical protein
nr
ID XP_012067628.1
description PREDICTED: iridoid synthase [Jatropha curcas]
swissprot
ID Q6PQJ9
description 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1
trembl
ID A0A067LNQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08472 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067034_020 0.0 - - PREDICTED: iridoid synthase [Jatropha curcas]
2 Hb_000836_150 0.1300007473 - - hypothetical protein POPTR_0003s13070g [Populus trichocarpa]
3 Hb_001541_220 0.1612783888 transcription factor TF Family: ERF hypothetical protein RCOM_0793640 [Ricinus communis]
4 Hb_146902_010 0.2030859424 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001102_310 0.2373000481 - - Protein AFR, putative [Ricinus communis]
6 Hb_119808_020 0.2411986777 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
7 Hb_000740_020 0.259982524 transcription factor TF Family: MYB-related asymmetric leaves1 and rough sheath, putative [Ricinus communis]
8 Hb_012092_070 0.2611546711 - - PREDICTED: uncharacterized protein LOC105644084 [Jatropha curcas]
9 Hb_091537_010 0.2617140847 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
10 Hb_019818_010 0.2629997093 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
11 Hb_011316_140 0.2669365684 - - PREDICTED: uncharacterized protein LOC105129591 [Populus euphratica]
12 Hb_017400_010 0.2689401874 - - unnamed protein product [Vitis vinifera]
13 Hb_132840_120 0.2723923533 - - Vacuolar protein sorting-associated protein 8 like [Glycine soja]
14 Hb_013654_030 0.2757255624 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
15 Hb_008971_030 0.278825891 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001437_160 0.2810048773 - - PREDICTED: high-affinity nitrate transporter 2.1-like [Jatropha curcas]
17 Hb_000302_350 0.2847443042 - - polygalacturonase, putative [Ricinus communis]
18 Hb_011476_020 0.2864495879 - - PREDICTED: glutamate dehydrogenase 2-like [Jatropha curcas]
19 Hb_004728_030 0.294112431 - - hypothetical protein, partial [Lactobacillus brevis]
20 Hb_002367_030 0.2955978972 - - hypothetical protein POPTR_0001s30725g [Populus trichocarpa]

Gene co-expression network

sample Hb_067034_020 Hb_067034_020 Hb_000836_150 Hb_000836_150 Hb_067034_020--Hb_000836_150 Hb_001541_220 Hb_001541_220 Hb_067034_020--Hb_001541_220 Hb_146902_010 Hb_146902_010 Hb_067034_020--Hb_146902_010 Hb_001102_310 Hb_001102_310 Hb_067034_020--Hb_001102_310 Hb_119808_020 Hb_119808_020 Hb_067034_020--Hb_119808_020 Hb_000740_020 Hb_000740_020 Hb_067034_020--Hb_000740_020 Hb_001437_160 Hb_001437_160 Hb_000836_150--Hb_001437_160 Hb_004728_030 Hb_004728_030 Hb_000836_150--Hb_004728_030 Hb_132840_120 Hb_132840_120 Hb_000836_150--Hb_132840_120 Hb_000836_150--Hb_000740_020 Hb_012092_070 Hb_012092_070 Hb_000836_150--Hb_012092_070 Hb_001541_220--Hb_146902_010 Hb_001541_220--Hb_119808_020 Hb_011316_140 Hb_011316_140 Hb_001541_220--Hb_011316_140 Hb_013654_030 Hb_013654_030 Hb_001541_220--Hb_013654_030 Hb_008971_030 Hb_008971_030 Hb_001541_220--Hb_008971_030 Hb_146902_010--Hb_119808_020 Hb_146902_010--Hb_008971_030 Hb_146902_010--Hb_011316_140 Hb_000284_280 Hb_000284_280 Hb_146902_010--Hb_000284_280 Hb_091537_010 Hb_091537_010 Hb_001102_310--Hb_091537_010 Hb_002367_030 Hb_002367_030 Hb_001102_310--Hb_002367_030 Hb_003540_180 Hb_003540_180 Hb_001102_310--Hb_003540_180 Hb_029508_020 Hb_029508_020 Hb_001102_310--Hb_029508_020 Hb_000541_030 Hb_000541_030 Hb_001102_310--Hb_000541_030 Hb_017400_010 Hb_017400_010 Hb_001102_310--Hb_017400_010 Hb_119808_020--Hb_029508_020 Hb_119808_020--Hb_000541_030 Hb_119808_020--Hb_091537_010 Hb_119808_020--Hb_013654_030 Hb_000281_050 Hb_000281_050 Hb_119808_020--Hb_000281_050 Hb_107429_010 Hb_107429_010 Hb_000740_020--Hb_107429_010 Hb_000740_020--Hb_001437_160 Hb_001226_010 Hb_001226_010 Hb_000740_020--Hb_001226_010 Hb_001143_150 Hb_001143_150 Hb_000740_020--Hb_001143_150 Hb_000917_170 Hb_000917_170 Hb_000740_020--Hb_000917_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0141955 0.0609477 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.03416 0 0 0

CAGE analysis