Hb_001307_110

Information

Type -
Description -
Location Contig1307: 112033-112503
Sequence    

Annotation

kegg
ID pop:POPTR_0002s26110g
description POPTRDRAFT_553333; hypothetical protein
nr
ID XP_012085274.1
description PREDICTED: uncharacterized protein LOC105644507 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2K6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001307_110 0.0 - - PREDICTED: uncharacterized protein LOC105644507 [Jatropha curcas]
2 Hb_065525_120 0.1462511495 - - dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
3 Hb_000879_230 0.1594907569 - - PREDICTED: tetratricopeptide repeat protein 7A [Jatropha curcas]
4 Hb_002320_080 0.1669880932 - - PREDICTED: MLO-like protein 13 isoform X2 [Jatropha curcas]
5 Hb_009780_050 0.1710207822 - - PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Jatropha curcas]
6 Hb_000365_370 0.1731662901 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000032_370 0.1734700922 - - PREDICTED: nucleoside diphosphate kinase III, chloroplastic/mitochondrial-like [Citrus sinensis]
8 Hb_000008_400 0.1758598643 - - PREDICTED: classical arabinogalactan protein 10-like [Nicotiana tomentosiformis]
9 Hb_052764_070 0.1761752864 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
10 Hb_133799_010 0.1767079445 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000946_100 0.1778032024 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
12 Hb_000107_510 0.1804760046 - - phosphate transporter [Manihot esculenta]
13 Hb_154038_020 0.1813572731 - - hypothetical protein JCGZ_05648 [Jatropha curcas]
14 Hb_019762_050 0.1814817925 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
15 Hb_027298_010 0.1821630662 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002374_300 0.1852517258 - - hypothetical protein JCGZ_12140 [Jatropha curcas]
17 Hb_004128_070 0.1894089676 - - PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Jatropha curcas]
18 Hb_000176_010 0.1914471648 - - PREDICTED: 50S ribosomal protein L35, chloroplastic [Jatropha curcas]
19 Hb_000012_110 0.195146709 - - hypothetical protein CICLE_v10008613mg [Citrus clementina]
20 Hb_006573_290 0.1965704491 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]

Gene co-expression network

sample Hb_001307_110 Hb_001307_110 Hb_065525_120 Hb_065525_120 Hb_001307_110--Hb_065525_120 Hb_000879_230 Hb_000879_230 Hb_001307_110--Hb_000879_230 Hb_002320_080 Hb_002320_080 Hb_001307_110--Hb_002320_080 Hb_009780_050 Hb_009780_050 Hb_001307_110--Hb_009780_050 Hb_000365_370 Hb_000365_370 Hb_001307_110--Hb_000365_370 Hb_000032_370 Hb_000032_370 Hb_001307_110--Hb_000032_370 Hb_065525_120--Hb_000032_370 Hb_027298_010 Hb_027298_010 Hb_065525_120--Hb_027298_010 Hb_065525_120--Hb_009780_050 Hb_154038_020 Hb_154038_020 Hb_065525_120--Hb_154038_020 Hb_001671_030 Hb_001671_030 Hb_065525_120--Hb_001671_030 Hb_007441_080 Hb_007441_080 Hb_065525_120--Hb_007441_080 Hb_000176_010 Hb_000176_010 Hb_000879_230--Hb_000176_010 Hb_000879_230--Hb_009780_050 Hb_000879_230--Hb_027298_010 Hb_003181_060 Hb_003181_060 Hb_000879_230--Hb_003181_060 Hb_001450_030 Hb_001450_030 Hb_000879_230--Hb_001450_030 Hb_000077_200 Hb_000077_200 Hb_002320_080--Hb_000077_200 Hb_000946_100 Hb_000946_100 Hb_002320_080--Hb_000946_100 Hb_029920_020 Hb_029920_020 Hb_002320_080--Hb_029920_020 Hb_026889_040 Hb_026889_040 Hb_002320_080--Hb_026889_040 Hb_015675_030 Hb_015675_030 Hb_002320_080--Hb_015675_030 Hb_009780_050--Hb_000176_010 Hb_001711_120 Hb_001711_120 Hb_009780_050--Hb_001711_120 Hb_000167_050 Hb_000167_050 Hb_009780_050--Hb_000167_050 Hb_002053_010 Hb_002053_010 Hb_009780_050--Hb_002053_010 Hb_001124_180 Hb_001124_180 Hb_009780_050--Hb_001124_180 Hb_000723_290 Hb_000723_290 Hb_000365_370--Hb_000723_290 Hb_003453_050 Hb_003453_050 Hb_000365_370--Hb_003453_050 Hb_000365_370--Hb_000167_050 Hb_000107_510 Hb_000107_510 Hb_000365_370--Hb_000107_510 Hb_010577_040 Hb_010577_040 Hb_000365_370--Hb_010577_040 Hb_004128_070 Hb_004128_070 Hb_000365_370--Hb_004128_070 Hb_004317_030 Hb_004317_030 Hb_000032_370--Hb_004317_030 Hb_000392_550 Hb_000392_550 Hb_000032_370--Hb_000392_550 Hb_002045_060 Hb_002045_060 Hb_000032_370--Hb_002045_060 Hb_000510_030 Hb_000510_030 Hb_000032_370--Hb_000510_030 Hb_000428_060 Hb_000428_060 Hb_000032_370--Hb_000428_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.442078 3.04127 13.0812 24.828 0.441894 0.746203
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.1627 21.788 12.8595 2.8265 21.4773

CAGE analysis