Hb_168326_010

Information

Type -
Description -
Location Contig168326: 102-608
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001398mg
description hypothetical protein
nr
ID XP_011001337.1
description PREDICTED: alpha-L-fucosidase 2-like isoform X2 [Populus euphratica]
swissprot
ID Q8L7W8
description Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=FUC95A PE=1 SV=1
trembl
ID A0A067LJH6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16272 PE=4 SV=1
Gene Ontology
ID GO:0047513
description alpha-l-fucosidase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168326_010 0.0 - - PREDICTED: alpha-L-fucosidase 2-like isoform X2 [Populus euphratica]
2 Hb_101319_020 0.2499983919 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
3 Hb_074836_010 0.2618339949 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004374_180 0.2660723386 - - GMP synthase, putative [Ricinus communis]
5 Hb_000959_310 0.2686220675 - - PREDICTED: WD repeat domain-containing protein 83 [Jatropha curcas]
6 Hb_002631_090 0.2819462392 - - -
7 Hb_033594_070 0.2844858016 - - PREDICTED: uncharacterized protein LOC105787685 isoform X1 [Gossypium raimondii]
8 Hb_003362_080 0.2873722297 - - beta-galactosidase, putative [Ricinus communis]
9 Hb_004162_230 0.2916449823 - - PREDICTED: histone H2B [Jatropha curcas]
10 Hb_001799_110 0.3005994711 - - PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X2 [Jatropha curcas]
11 Hb_000139_490 0.3049272653 - - PREDICTED: transcription factor MUTE [Jatropha curcas]
12 Hb_003750_070 0.3074239081 - - PREDICTED: psbQ-like protein 3, chloroplastic [Jatropha curcas]
13 Hb_003078_060 0.3137814141 - - 60S ribosomal protein L32, putative [Ricinus communis]
14 Hb_003602_010 0.3140959946 - - serine hydroxymethyltransferase, partial [Populus alba]
15 Hb_000544_030 0.3148909248 - - conserved hypothetical protein [Ricinus communis]
16 Hb_006970_140 0.3303181432 - - PREDICTED: histone H3.2-like [Solanum lycopersicum]
17 Hb_001431_110 0.330333886 - - glycerol-3-phosphate transporter family protein [Populus trichocarpa]
18 Hb_004102_030 0.3312936955 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
19 Hb_000948_200 0.3316601196 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
20 Hb_003120_100 0.331672576 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]

Gene co-expression network

sample Hb_168326_010 Hb_168326_010 Hb_101319_020 Hb_101319_020 Hb_168326_010--Hb_101319_020 Hb_074836_010 Hb_074836_010 Hb_168326_010--Hb_074836_010 Hb_004374_180 Hb_004374_180 Hb_168326_010--Hb_004374_180 Hb_000959_310 Hb_000959_310 Hb_168326_010--Hb_000959_310 Hb_002631_090 Hb_002631_090 Hb_168326_010--Hb_002631_090 Hb_033594_070 Hb_033594_070 Hb_168326_010--Hb_033594_070 Hb_003120_100 Hb_003120_100 Hb_101319_020--Hb_003120_100 Hb_004200_030 Hb_004200_030 Hb_101319_020--Hb_004200_030 Hb_007386_010 Hb_007386_010 Hb_101319_020--Hb_007386_010 Hb_003602_010 Hb_003602_010 Hb_101319_020--Hb_003602_010 Hb_002874_020 Hb_002874_020 Hb_101319_020--Hb_002874_020 Hb_000926_230 Hb_000926_230 Hb_074836_010--Hb_000926_230 Hb_009620_090 Hb_009620_090 Hb_074836_010--Hb_009620_090 Hb_155541_010 Hb_155541_010 Hb_074836_010--Hb_155541_010 Hb_164255_010 Hb_164255_010 Hb_074836_010--Hb_164255_010 Hb_001545_050 Hb_001545_050 Hb_074836_010--Hb_001545_050 Hb_118228_010 Hb_118228_010 Hb_074836_010--Hb_118228_010 Hb_012532_030 Hb_012532_030 Hb_004374_180--Hb_012532_030 Hb_068922_010 Hb_068922_010 Hb_004374_180--Hb_068922_010 Hb_013492_010 Hb_013492_010 Hb_004374_180--Hb_013492_010 Hb_004374_180--Hb_000959_310 Hb_010068_100 Hb_010068_100 Hb_004374_180--Hb_010068_100 Hb_002228_100 Hb_002228_100 Hb_004374_180--Hb_002228_100 Hb_001799_110 Hb_001799_110 Hb_000959_310--Hb_001799_110 Hb_012120_030 Hb_012120_030 Hb_000959_310--Hb_012120_030 Hb_114336_030 Hb_114336_030 Hb_000959_310--Hb_114336_030 Hb_004931_080 Hb_004931_080 Hb_000959_310--Hb_004931_080 Hb_188209_010 Hb_188209_010 Hb_000959_310--Hb_188209_010 Hb_003750_070 Hb_003750_070 Hb_000959_310--Hb_003750_070 Hb_002107_090 Hb_002107_090 Hb_002631_090--Hb_002107_090 Hb_005679_080 Hb_005679_080 Hb_002631_090--Hb_005679_080 Hb_000345_260 Hb_000345_260 Hb_002631_090--Hb_000345_260 Hb_002539_030 Hb_002539_030 Hb_002631_090--Hb_002539_030 Hb_000731_230 Hb_000731_230 Hb_002631_090--Hb_000731_230 Hb_000566_020 Hb_000566_020 Hb_033594_070--Hb_000566_020 Hb_001529_070 Hb_001529_070 Hb_033594_070--Hb_001529_070 Hb_014834_010 Hb_014834_010 Hb_033594_070--Hb_014834_010 Hb_002081_170 Hb_002081_170 Hb_033594_070--Hb_002081_170 Hb_003581_300 Hb_003581_300 Hb_033594_070--Hb_003581_300 Hb_004102_030 Hb_004102_030 Hb_033594_070--Hb_004102_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.215282 0.0580725 0.879724 0.538309 0 0.204435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04957 0.309216 0 0 0

CAGE analysis