Hb_002631_090

Information

Type -
Description -
Location Contig2631: 75981-77316
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002631_090 0.0 - - -
2 Hb_002107_090 0.2669917686 transcription factor TF Family: bZIP Basic-leucine zipper transcription factor family protein, putative [Theobroma cacao]
3 Hb_168326_010 0.2819462392 - - PREDICTED: alpha-L-fucosidase 2-like isoform X2 [Populus euphratica]
4 Hb_005679_080 0.2984104125 - - PREDICTED: PH-interacting protein-like [Populus euphratica]
5 Hb_000345_260 0.3001115037 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Citrus sinensis]
6 Hb_002539_030 0.3146516093 - - PREDICTED: uncharacterized protein LOC105630961 [Jatropha curcas]
7 Hb_000731_230 0.3156055421 - - PREDICTED: abnormal spindle-like microcephaly-associated protein homolog [Jatropha curcas]
8 Hb_052764_040 0.3185367535 - - syntaxin 125 family protein [Populus trichocarpa]
9 Hb_000521_190 0.3207408292 desease resistance Gene Name: TIR hypothetical protein JCGZ_25500 [Jatropha curcas]
10 Hb_011689_130 0.3218393577 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
11 Hb_002218_100 0.3225723774 - - PREDICTED: uncharacterized protein At2g34160 [Jatropha curcas]
12 Hb_003776_040 0.3237806047 - - PREDICTED: RING finger protein 165-like isoform X2 [Populus euphratica]
13 Hb_004162_230 0.3254885112 - - PREDICTED: histone H2B [Jatropha curcas]
14 Hb_158384_010 0.327174316 - - poly(A) polymerase, putative [Ricinus communis]
15 Hb_000025_380 0.3276051231 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
16 Hb_004449_140 0.3285857904 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
17 Hb_005694_070 0.3290792393 - - kinase, putative [Ricinus communis]
18 Hb_009411_040 0.3301549418 - - -
19 Hb_001799_110 0.3349942806 - - PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X2 [Jatropha curcas]
20 Hb_005000_250 0.336803703 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 4, mitochondrial [Vitis vinifera]

Gene co-expression network

sample Hb_002631_090 Hb_002631_090 Hb_002107_090 Hb_002107_090 Hb_002631_090--Hb_002107_090 Hb_168326_010 Hb_168326_010 Hb_002631_090--Hb_168326_010 Hb_005679_080 Hb_005679_080 Hb_002631_090--Hb_005679_080 Hb_000345_260 Hb_000345_260 Hb_002631_090--Hb_000345_260 Hb_002539_030 Hb_002539_030 Hb_002631_090--Hb_002539_030 Hb_000731_230 Hb_000731_230 Hb_002631_090--Hb_000731_230 Hb_002107_090--Hb_000345_260 Hb_002218_100 Hb_002218_100 Hb_002107_090--Hb_002218_100 Hb_000987_100 Hb_000987_100 Hb_002107_090--Hb_000987_100 Hb_000123_140 Hb_000123_140 Hb_002107_090--Hb_000123_140 Hb_005194_040 Hb_005194_040 Hb_002107_090--Hb_005194_040 Hb_009411_040 Hb_009411_040 Hb_002107_090--Hb_009411_040 Hb_101319_020 Hb_101319_020 Hb_168326_010--Hb_101319_020 Hb_074836_010 Hb_074836_010 Hb_168326_010--Hb_074836_010 Hb_004374_180 Hb_004374_180 Hb_168326_010--Hb_004374_180 Hb_000959_310 Hb_000959_310 Hb_168326_010--Hb_000959_310 Hb_033594_070 Hb_033594_070 Hb_168326_010--Hb_033594_070 Hb_003078_060 Hb_003078_060 Hb_005679_080--Hb_003078_060 Hb_005679_080--Hb_000731_230 Hb_073973_030 Hb_073973_030 Hb_005679_080--Hb_073973_030 Hb_003902_060 Hb_003902_060 Hb_005679_080--Hb_003902_060 Hb_028341_010 Hb_028341_010 Hb_005679_080--Hb_028341_010 Hb_078568_010 Hb_078568_010 Hb_005679_080--Hb_078568_010 Hb_000345_260--Hb_000987_100 Hb_000230_480 Hb_000230_480 Hb_000345_260--Hb_000230_480 Hb_004117_190 Hb_004117_190 Hb_000345_260--Hb_004117_190 Hb_001195_640 Hb_001195_640 Hb_000345_260--Hb_001195_640 Hb_002411_060 Hb_002411_060 Hb_000345_260--Hb_002411_060 Hb_000032_190 Hb_000032_190 Hb_002539_030--Hb_000032_190 Hb_076223_020 Hb_076223_020 Hb_002539_030--Hb_076223_020 Hb_012019_040 Hb_012019_040 Hb_002539_030--Hb_012019_040 Hb_001878_020 Hb_001878_020 Hb_002539_030--Hb_001878_020 Hb_002982_030 Hb_002982_030 Hb_002539_030--Hb_002982_030 Hb_008725_160 Hb_008725_160 Hb_002539_030--Hb_008725_160 Hb_000731_230--Hb_003902_060 Hb_000731_230--Hb_078568_010 Hb_075230_010 Hb_075230_010 Hb_000731_230--Hb_075230_010 Hb_001196_040 Hb_001196_040 Hb_000731_230--Hb_001196_040 Hb_149714_010 Hb_149714_010 Hb_000731_230--Hb_149714_010 Hb_100105_010 Hb_100105_010 Hb_000731_230--Hb_100105_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.272273 0.832679 2.35984 0.427871 0 0.255406
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.29846 0.255403 0 0 0

CAGE analysis