Hb_000032_190

Information

Type -
Description -
Location Contig32: 166403-168413
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33703: 169002-176210
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_190 0.0 - - -
2 Hb_002539_030 0.2041569147 - - PREDICTED: uncharacterized protein LOC105630961 [Jatropha curcas]
3 Hb_187620_010 0.2613607948 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
4 Hb_009683_050 0.2772989633 - - wall-associated kinase, putative [Ricinus communis]
5 Hb_000092_160 0.2810895596 - - PREDICTED: 18 kDa seed maturation protein [Populus euphratica]
6 Hb_000656_180 0.2921282621 - - PREDICTED: uncharacterized protein LOC105631371 [Jatropha curcas]
7 Hb_005248_020 0.2938016588 - - hypothetical protein JCGZ_23770 [Jatropha curcas]
8 Hb_076223_020 0.3125965323 - - -
9 Hb_001268_060 0.3152995785 - - conserved hypothetical protein [Ricinus communis]
10 Hb_082225_010 0.317243044 - - DWNN domain isoform 2 [Theobroma cacao]
11 Hb_031004_010 0.3180633053 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
12 Hb_022137_020 0.3192606271 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
13 Hb_003023_060 0.3196725682 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
14 Hb_006043_020 0.3207788947 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
15 Hb_002982_030 0.3210512763 - - Chalcone synthase, putative [Ricinus communis]
16 Hb_180486_010 0.3217450599 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
17 Hb_008406_080 0.3224569922 - - Nonspecific lipid-transfer protein 3 precursor, putative [Ricinus communis]
18 Hb_031530_010 0.3250912236 - - DWNN domain isoform 2 [Theobroma cacao]
19 Hb_000086_610 0.32787733 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
20 Hb_036754_040 0.3306927533 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_000032_190 Hb_000032_190 Hb_002539_030 Hb_002539_030 Hb_000032_190--Hb_002539_030 Hb_187620_010 Hb_187620_010 Hb_000032_190--Hb_187620_010 Hb_009683_050 Hb_009683_050 Hb_000032_190--Hb_009683_050 Hb_000092_160 Hb_000092_160 Hb_000032_190--Hb_000092_160 Hb_000656_180 Hb_000656_180 Hb_000032_190--Hb_000656_180 Hb_005248_020 Hb_005248_020 Hb_000032_190--Hb_005248_020 Hb_076223_020 Hb_076223_020 Hb_002539_030--Hb_076223_020 Hb_012019_040 Hb_012019_040 Hb_002539_030--Hb_012019_040 Hb_001878_020 Hb_001878_020 Hb_002539_030--Hb_001878_020 Hb_002982_030 Hb_002982_030 Hb_002539_030--Hb_002982_030 Hb_008725_160 Hb_008725_160 Hb_002539_030--Hb_008725_160 Hb_010136_020 Hb_010136_020 Hb_187620_010--Hb_010136_020 Hb_002006_110 Hb_002006_110 Hb_187620_010--Hb_002006_110 Hb_001677_140 Hb_001677_140 Hb_187620_010--Hb_001677_140 Hb_036754_040 Hb_036754_040 Hb_187620_010--Hb_036754_040 Hb_001511_200 Hb_001511_200 Hb_187620_010--Hb_001511_200 Hb_128851_020 Hb_128851_020 Hb_187620_010--Hb_128851_020 Hb_000086_610 Hb_000086_610 Hb_009683_050--Hb_000086_610 Hb_006538_030 Hb_006538_030 Hb_009683_050--Hb_006538_030 Hb_019654_010 Hb_019654_010 Hb_009683_050--Hb_019654_010 Hb_133845_010 Hb_133845_010 Hb_009683_050--Hb_133845_010 Hb_002660_090 Hb_002660_090 Hb_009683_050--Hb_002660_090 Hb_000322_120 Hb_000322_120 Hb_009683_050--Hb_000322_120 Hb_001776_230 Hb_001776_230 Hb_000092_160--Hb_001776_230 Hb_000313_020 Hb_000313_020 Hb_000092_160--Hb_000313_020 Hb_001205_010 Hb_001205_010 Hb_000092_160--Hb_001205_010 Hb_000092_160--Hb_008725_160 Hb_000092_160--Hb_002539_030 Hb_000656_180--Hb_009683_050 Hb_002445_130 Hb_002445_130 Hb_000656_180--Hb_002445_130 Hb_086002_010 Hb_086002_010 Hb_000656_180--Hb_086002_010 Hb_000659_020 Hb_000659_020 Hb_000656_180--Hb_000659_020 Hb_133508_010 Hb_133508_010 Hb_000656_180--Hb_133508_010 Hb_000029_410 Hb_000029_410 Hb_000656_180--Hb_000029_410 Hb_004586_120 Hb_004586_120 Hb_005248_020--Hb_004586_120 Hb_125201_010 Hb_125201_010 Hb_005248_020--Hb_125201_010 Hb_157957_010 Hb_157957_010 Hb_005248_020--Hb_157957_010 Hb_001257_040 Hb_001257_040 Hb_005248_020--Hb_001257_040 Hb_000322_020 Hb_000322_020 Hb_005248_020--Hb_000322_020 Hb_000313_190 Hb_000313_190 Hb_005248_020--Hb_000313_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.528032 0.190532 0.154012 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.218177 0 0 0 0

CAGE analysis