Hb_076223_020

Information

Type -
Description -
Location Contig76223: 4031-4899
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_076223_020 0.0 - - -
2 Hb_012019_040 0.2219073739 - - -
3 Hb_002539_030 0.2272923855 - - PREDICTED: uncharacterized protein LOC105630961 [Jatropha curcas]
4 Hb_004204_180 0.2743669643 - - -
5 Hb_002539_060 0.2799016058 - - -
6 Hb_003687_260 0.2799036175 - - PREDICTED: inorganic phosphate transporter 1-4-like [Camelina sativa]
7 Hb_049719_010 0.2799264912 - - ATP binding protein, putative [Ricinus communis]
8 Hb_081212_010 0.2801077674 - - -
9 Hb_173479_010 0.2801974195 - - -
10 Hb_019429_010 0.2818467344 - - conserved hypothetical protein [Ricinus communis]
11 Hb_072376_010 0.2824535558 - - -
12 Hb_000963_100 0.2824896709 - - Protein SUA5, putative [Ricinus communis]
13 Hb_052135_040 0.2824976592 - - -
14 Hb_095589_010 0.2825325274 - - Ankyrin repeat family protein, putative [Theobroma cacao]
15 Hb_000473_130 0.2825488325 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
16 Hb_000603_060 0.2825501218 - - putative gag protein [Coffea canephora]
17 Hb_004785_110 0.2825554981 - - -
18 Hb_002192_060 0.2831608968 - - -
19 Hb_000266_090 0.2833973627 - - -
20 Hb_048635_010 0.2834858281 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_076223_020 Hb_076223_020 Hb_012019_040 Hb_012019_040 Hb_076223_020--Hb_012019_040 Hb_002539_030 Hb_002539_030 Hb_076223_020--Hb_002539_030 Hb_004204_180 Hb_004204_180 Hb_076223_020--Hb_004204_180 Hb_002539_060 Hb_002539_060 Hb_076223_020--Hb_002539_060 Hb_003687_260 Hb_003687_260 Hb_076223_020--Hb_003687_260 Hb_049719_010 Hb_049719_010 Hb_076223_020--Hb_049719_010 Hb_012019_040--Hb_004204_180 Hb_012019_040--Hb_002539_030 Hb_008725_160 Hb_008725_160 Hb_012019_040--Hb_008725_160 Hb_004117_250 Hb_004117_250 Hb_012019_040--Hb_004117_250 Hb_001277_200 Hb_001277_200 Hb_012019_040--Hb_001277_200 Hb_000032_190 Hb_000032_190 Hb_002539_030--Hb_000032_190 Hb_001878_020 Hb_001878_020 Hb_002539_030--Hb_001878_020 Hb_002982_030 Hb_002982_030 Hb_002539_030--Hb_002982_030 Hb_002539_030--Hb_008725_160 Hb_000164_090 Hb_000164_090 Hb_004204_180--Hb_000164_090 Hb_000540_220 Hb_000540_220 Hb_004204_180--Hb_000540_220 Hb_104641_010 Hb_104641_010 Hb_004204_180--Hb_104641_010 Hb_011942_030 Hb_011942_030 Hb_004204_180--Hb_011942_030 Hb_002539_060--Hb_003687_260 Hb_002539_060--Hb_049719_010 Hb_081212_010 Hb_081212_010 Hb_002539_060--Hb_081212_010 Hb_173479_010 Hb_173479_010 Hb_002539_060--Hb_173479_010 Hb_019429_010 Hb_019429_010 Hb_002539_060--Hb_019429_010 Hb_072376_010 Hb_072376_010 Hb_002539_060--Hb_072376_010 Hb_003687_260--Hb_049719_010 Hb_003687_260--Hb_173479_010 Hb_003687_260--Hb_081212_010 Hb_003687_260--Hb_019429_010 Hb_003687_260--Hb_072376_010 Hb_049719_010--Hb_081212_010 Hb_049719_010--Hb_173479_010 Hb_049719_010--Hb_019429_010 Hb_002192_060 Hb_002192_060 Hb_049719_010--Hb_002192_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.8732 4.36181 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.77979 0 0 0 0

CAGE analysis