Hb_081212_010

Information

Type -
Description -
Location Contig81212: 269-495
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081212_010 0.0 - - -
2 Hb_049719_010 0.0073085486 - - ATP binding protein, putative [Ricinus communis]
3 Hb_002539_060 0.0113523746 - - -
4 Hb_003687_260 0.0123190333 - - PREDICTED: inorganic phosphate transporter 1-4-like [Camelina sativa]
5 Hb_173479_010 0.0246226471 - - -
6 Hb_002192_060 0.0334536542 - - -
7 Hb_048635_010 0.0356398341 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_019429_010 0.0456632996 - - conserved hypothetical protein [Ricinus communis]
9 Hb_072376_010 0.050695126 - - -
10 Hb_000963_100 0.0509748405 - - Protein SUA5, putative [Ricinus communis]
11 Hb_052135_040 0.0510364503 - - -
12 Hb_095589_010 0.051304281 - - Ankyrin repeat family protein, putative [Theobroma cacao]
13 Hb_000473_130 0.0514289235 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
14 Hb_000603_060 0.0514387637 - - putative gag protein [Coffea canephora]
15 Hb_004785_110 0.0514797689 - - -
16 Hb_000266_090 0.0574625683 - - -
17 Hb_001740_020 0.0593895327 - - hypothetical protein JCGZ_23765 [Jatropha curcas]
18 Hb_007966_010 0.0626662055 - - carbohydrate binding protein, putative [Ricinus communis]
19 Hb_086063_030 0.0633819219 - - PREDICTED: pre-mRNA-processing-splicing factor 8-like [Camelina sativa]
20 Hb_011549_020 0.0712828079 - - -

Gene co-expression network

sample Hb_081212_010 Hb_081212_010 Hb_049719_010 Hb_049719_010 Hb_081212_010--Hb_049719_010 Hb_002539_060 Hb_002539_060 Hb_081212_010--Hb_002539_060 Hb_003687_260 Hb_003687_260 Hb_081212_010--Hb_003687_260 Hb_173479_010 Hb_173479_010 Hb_081212_010--Hb_173479_010 Hb_002192_060 Hb_002192_060 Hb_081212_010--Hb_002192_060 Hb_048635_010 Hb_048635_010 Hb_081212_010--Hb_048635_010 Hb_049719_010--Hb_002539_060 Hb_049719_010--Hb_003687_260 Hb_049719_010--Hb_173479_010 Hb_019429_010 Hb_019429_010 Hb_049719_010--Hb_019429_010 Hb_049719_010--Hb_002192_060 Hb_002539_060--Hb_003687_260 Hb_002539_060--Hb_173479_010 Hb_002539_060--Hb_019429_010 Hb_072376_010 Hb_072376_010 Hb_002539_060--Hb_072376_010 Hb_003687_260--Hb_173479_010 Hb_003687_260--Hb_019429_010 Hb_003687_260--Hb_072376_010 Hb_173479_010--Hb_019429_010 Hb_173479_010--Hb_072376_010 Hb_002192_060--Hb_048635_010 Hb_000742_050 Hb_000742_050 Hb_002192_060--Hb_000742_050 Hb_039385_010 Hb_039385_010 Hb_002192_060--Hb_039385_010 Hb_011903_030 Hb_011903_030 Hb_002192_060--Hb_011903_030 Hb_048635_010--Hb_000742_050 Hb_048635_010--Hb_039385_010 Hb_048635_010--Hb_011903_030 Hb_048635_010--Hb_049719_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.24798 0.878584 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis