Hb_005248_020

Information

Type -
Description -
Location Contig5248: 10119-11353
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID KDP42828.1
description hypothetical protein JCGZ_23770 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6I7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23770 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005248_020 0.0 - - hypothetical protein JCGZ_23770 [Jatropha curcas]
2 Hb_004586_120 0.0933207477 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
3 Hb_125201_010 0.1017288678 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
4 Hb_157957_010 0.1105669641 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
5 Hb_001257_040 0.1105755297 - - PREDICTED: uncharacterized protein LOC105640055 [Jatropha curcas]
6 Hb_000322_020 0.1156070703 - - PREDICTED: uncharacterized protein LOC105637914 [Jatropha curcas]
7 Hb_000313_190 0.1173076207 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
8 Hb_064692_010 0.1195663484 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_000338_020 0.1197317665 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
10 Hb_000032_150 0.1216599115 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
11 Hb_005618_020 0.1236901171 - - hypothetical protein RCOM_1342750 [Ricinus communis]
12 Hb_006648_030 0.1241214746 - - Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus communis]
13 Hb_047955_010 0.1246903755 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
14 Hb_000529_050 0.1268786173 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
15 Hb_036754_040 0.1282034186 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
16 Hb_124953_010 0.1283434473 - - hypothetical protein RCOM_1314600 [Ricinus communis]
17 Hb_034581_010 0.1292312157 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
18 Hb_027506_060 0.1305991848 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
19 Hb_002252_030 0.1323799984 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
20 Hb_034642_010 0.1342100001 - - PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]

Gene co-expression network

sample Hb_005248_020 Hb_005248_020 Hb_004586_120 Hb_004586_120 Hb_005248_020--Hb_004586_120 Hb_125201_010 Hb_125201_010 Hb_005248_020--Hb_125201_010 Hb_157957_010 Hb_157957_010 Hb_005248_020--Hb_157957_010 Hb_001257_040 Hb_001257_040 Hb_005248_020--Hb_001257_040 Hb_000322_020 Hb_000322_020 Hb_005248_020--Hb_000322_020 Hb_000313_190 Hb_000313_190 Hb_005248_020--Hb_000313_190 Hb_004586_120--Hb_000322_020 Hb_004586_120--Hb_001257_040 Hb_004586_120--Hb_125201_010 Hb_000422_050 Hb_000422_050 Hb_004586_120--Hb_000422_050 Hb_005618_020 Hb_005618_020 Hb_004586_120--Hb_005618_020 Hb_001477_080 Hb_001477_080 Hb_004586_120--Hb_001477_080 Hb_009707_010 Hb_009707_010 Hb_125201_010--Hb_009707_010 Hb_000338_020 Hb_000338_020 Hb_125201_010--Hb_000338_020 Hb_125201_010--Hb_005618_020 Hb_125201_010--Hb_157957_010 Hb_114932_010 Hb_114932_010 Hb_125201_010--Hb_114932_010 Hb_034581_010 Hb_034581_010 Hb_157957_010--Hb_034581_010 Hb_036754_040 Hb_036754_040 Hb_157957_010--Hb_036754_040 Hb_110356_010 Hb_110356_010 Hb_157957_010--Hb_110356_010 Hb_000359_230 Hb_000359_230 Hb_157957_010--Hb_000359_230 Hb_002548_030 Hb_002548_030 Hb_157957_010--Hb_002548_030 Hb_064692_010 Hb_064692_010 Hb_157957_010--Hb_064692_010 Hb_000032_150 Hb_000032_150 Hb_001257_040--Hb_000032_150 Hb_001257_040--Hb_000422_050 Hb_001257_040--Hb_000322_020 Hb_124953_010 Hb_124953_010 Hb_001257_040--Hb_124953_010 Hb_004032_220 Hb_004032_220 Hb_001257_040--Hb_004032_220 Hb_000322_020--Hb_000422_050 Hb_002849_030 Hb_002849_030 Hb_000322_020--Hb_002849_030 Hb_000347_360 Hb_000347_360 Hb_000322_020--Hb_000347_360 Hb_000529_050 Hb_000529_050 Hb_000322_020--Hb_000529_050 Hb_000313_190--Hb_000529_050 Hb_000313_190--Hb_001477_080 Hb_000221_280 Hb_000221_280 Hb_000313_190--Hb_000221_280 Hb_000731_020 Hb_000731_020 Hb_000313_190--Hb_000731_020 Hb_003071_040 Hb_003071_040 Hb_000313_190--Hb_003071_040 Hb_004242_160 Hb_004242_160 Hb_000313_190--Hb_004242_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.99819 2.21718 1.88139 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.146384 0 0 0 0.114785

CAGE analysis