Hb_114336_030

Information

Type -
Description -
Location Contig114336: 48306-51507
Sequence    

Annotation

kegg
ID rcu:RCOM_0864030
description hypothetical protein
nr
ID XP_012082185.1
description PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2P7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19401 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04383: 51271-51490
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114336_030 0.0 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
2 Hb_001097_100 0.1147179073 - - Chaperone DnaJ-domain superfamily protein [Theobroma cacao]
3 Hb_001114_160 0.1246723545 - - PREDICTED: beta carbonic anhydrase 5, chloroplastic [Jatropha curcas]
4 Hb_182424_030 0.1288868027 - - PREDICTED: conserved oligomeric Golgi complex subunit 8 [Vitis vinifera]
5 Hb_000170_200 0.1408101325 - - PREDICTED: protein KRTCAP2 homolog [Jatropha curcas]
6 Hb_001221_320 0.1425094542 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-1 isoform X1 [Jatropha curcas]
7 Hb_003848_040 0.1481679026 - - PREDICTED: phosphatidylinositol-glycan biosynthesis class X protein isoform X1 [Jatropha curcas]
8 Hb_001396_210 0.1484631863 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003544_020 0.1547036129 - - PREDICTED: elongin-A [Jatropha curcas]
10 Hb_000331_250 0.1559528008 - - PREDICTED: mitochondrial pyruvate carrier 1 [Vitis vinifera]
11 Hb_001140_070 0.1573154551 - - Chromosome transmission fidelity protein 8, putative isoform 2 [Theobroma cacao]
12 Hb_001416_010 0.1593440889 - - Thioredoxin H-type, putative [Ricinus communis]
13 Hb_000094_330 0.1607252733 - - PREDICTED: COP9 signalosome complex subunit 4 [Jatropha curcas]
14 Hb_001123_030 0.160955164 - - ABC transporter family protein [Hevea brasiliensis]
15 Hb_002471_250 0.1617137106 - - Tapt1/CMV receptor, putative isoform 2 [Theobroma cacao]
16 Hb_005773_060 0.1628015698 - - defender against cell death, putative [Ricinus communis]
17 Hb_002820_050 0.1638827837 - - PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Jatropha curcas]
18 Hb_003050_110 0.1640129939 - - PREDICTED: prefoldin subunit 6 [Populus euphratica]
19 Hb_029510_020 0.1641028375 - - hypothetical protein JCGZ_06306 [Jatropha curcas]
20 Hb_001579_230 0.1651758025 - - PREDICTED: uncharacterized protein LOC105644968 [Jatropha curcas]

Gene co-expression network

sample Hb_114336_030 Hb_114336_030 Hb_001097_100 Hb_001097_100 Hb_114336_030--Hb_001097_100 Hb_001114_160 Hb_001114_160 Hb_114336_030--Hb_001114_160 Hb_182424_030 Hb_182424_030 Hb_114336_030--Hb_182424_030 Hb_000170_200 Hb_000170_200 Hb_114336_030--Hb_000170_200 Hb_001221_320 Hb_001221_320 Hb_114336_030--Hb_001221_320 Hb_003848_040 Hb_003848_040 Hb_114336_030--Hb_003848_040 Hb_001699_210 Hb_001699_210 Hb_001097_100--Hb_001699_210 Hb_001097_100--Hb_001114_160 Hb_032202_180 Hb_032202_180 Hb_001097_100--Hb_032202_180 Hb_000228_090 Hb_000228_090 Hb_001097_100--Hb_000228_090 Hb_012340_090 Hb_012340_090 Hb_001097_100--Hb_012340_090 Hb_002972_010 Hb_002972_010 Hb_001114_160--Hb_002972_010 Hb_029510_020 Hb_029510_020 Hb_001114_160--Hb_029510_020 Hb_001114_160--Hb_003848_040 Hb_003556_030 Hb_003556_030 Hb_001114_160--Hb_003556_030 Hb_000731_160 Hb_000731_160 Hb_182424_030--Hb_000731_160 Hb_182424_030--Hb_003848_040 Hb_001472_100 Hb_001472_100 Hb_182424_030--Hb_001472_100 Hb_000270_680 Hb_000270_680 Hb_182424_030--Hb_000270_680 Hb_000185_050 Hb_000185_050 Hb_182424_030--Hb_000185_050 Hb_000297_160 Hb_000297_160 Hb_182424_030--Hb_000297_160 Hb_002518_030 Hb_002518_030 Hb_000170_200--Hb_002518_030 Hb_011671_040 Hb_011671_040 Hb_000170_200--Hb_011671_040 Hb_000110_310 Hb_000110_310 Hb_000170_200--Hb_000110_310 Hb_008748_040 Hb_008748_040 Hb_000170_200--Hb_008748_040 Hb_003688_130 Hb_003688_130 Hb_000170_200--Hb_003688_130 Hb_000579_120 Hb_000579_120 Hb_000170_200--Hb_000579_120 Hb_003544_020 Hb_003544_020 Hb_001221_320--Hb_003544_020 Hb_002349_040 Hb_002349_040 Hb_001221_320--Hb_002349_040 Hb_002811_260 Hb_002811_260 Hb_001221_320--Hb_002811_260 Hb_005773_060 Hb_005773_060 Hb_001221_320--Hb_005773_060 Hb_008686_080 Hb_008686_080 Hb_001221_320--Hb_008686_080 Hb_001454_400 Hb_001454_400 Hb_001221_320--Hb_001454_400 Hb_001105_170 Hb_001105_170 Hb_003848_040--Hb_001105_170 Hb_012565_070 Hb_012565_070 Hb_003848_040--Hb_012565_070 Hb_003848_040--Hb_012340_090 Hb_003207_180 Hb_003207_180 Hb_003848_040--Hb_003207_180 Hb_000300_260 Hb_000300_260 Hb_003848_040--Hb_000300_260 Hb_003848_040--Hb_001472_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.68349 0.803455 5.47224 3.90511 2.44027 2.33088
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.42804 3.48573 0.379718 1.81272 1.50923

CAGE analysis