Hb_000731_160

Information

Type -
Description -
Location Contig731: 164564-167755
Sequence    

Annotation

kegg
ID rcu:RCOM_0905310
description Adenosine deaminase, putative (EC:3.5.4.4)
nr
ID XP_012091381.1
description PREDICTED: adenosine deaminase-like protein [Jatropha curcas]
swissprot
ID Q80SY6
description Adenosine deaminase-like protein OS=Mus musculus GN=Adal PE=2 SV=1
trembl
ID B9RXP2
description Adenosine deaminase, putative OS=Ricinus communis GN=RCOM_0905310 PE=4 SV=1
Gene Ontology
ID GO:0004000
description adenosine deaminase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55976: 164628-167591
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000731_160 0.0 - - PREDICTED: adenosine deaminase-like protein [Jatropha curcas]
2 Hb_000012_250 0.0763711962 - - hypothetical protein L484_019524 [Morus notabilis]
3 Hb_002477_300 0.0777281077 - - transcription factor, putative [Ricinus communis]
4 Hb_146673_010 0.0799581087 - - PREDICTED: tryptophan synthase alpha chain-like [Jatropha curcas]
5 Hb_001472_100 0.086302349 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
6 Hb_006570_140 0.090691266 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
7 Hb_000185_050 0.0912391229 - - PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
8 Hb_000465_090 0.0921997952 - - PREDICTED: uncharacterized protein LOC105632289 [Jatropha curcas]
9 Hb_182424_030 0.0928278414 - - PREDICTED: conserved oligomeric Golgi complex subunit 8 [Vitis vinifera]
10 Hb_003942_020 0.0928646074 - - PREDICTED: multiple RNA-binding domain-containing protein 1 isoform X1 [Jatropha curcas]
11 Hb_004837_270 0.0940465554 - - PREDICTED: cinnamoyl-CoA reductase 1 [Jatropha curcas]
12 Hb_000035_500 0.0973192765 - - PREDICTED: ADP-ribosylation factor 1 isoform X2 [Tarenaya hassleriana]
13 Hb_002946_190 0.0975116172 - - PREDICTED: nudix hydrolase 26, chloroplastic [Jatropha curcas]
14 Hb_002820_050 0.0980067514 - - PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Jatropha curcas]
15 Hb_002338_020 0.0986575817 - - PREDICTED: serine/arginine-rich splicing factor SR34A [Jatropha curcas]
16 Hb_107879_010 0.1000425961 - - phosphoglycerate mutase, putative [Ricinus communis]
17 Hb_002876_240 0.1016322919 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic-like [Jatropha curcas]
18 Hb_000270_680 0.1024661675 - - hypothetical protein POPTR_0015s08420g [Populus trichocarpa]
19 Hb_002168_060 0.1032544391 - - PREDICTED: inositol-pentakisphosphate 2-kinase-like isoform X1 [Jatropha curcas]
20 Hb_004453_130 0.1032872055 - - PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000731_160 Hb_000731_160 Hb_000012_250 Hb_000012_250 Hb_000731_160--Hb_000012_250 Hb_002477_300 Hb_002477_300 Hb_000731_160--Hb_002477_300 Hb_146673_010 Hb_146673_010 Hb_000731_160--Hb_146673_010 Hb_001472_100 Hb_001472_100 Hb_000731_160--Hb_001472_100 Hb_006570_140 Hb_006570_140 Hb_000731_160--Hb_006570_140 Hb_000185_050 Hb_000185_050 Hb_000731_160--Hb_000185_050 Hb_002759_190 Hb_002759_190 Hb_000012_250--Hb_002759_190 Hb_001863_380 Hb_001863_380 Hb_000012_250--Hb_001863_380 Hb_107879_010 Hb_107879_010 Hb_000012_250--Hb_107879_010 Hb_000163_100 Hb_000163_100 Hb_000012_250--Hb_000163_100 Hb_000012_250--Hb_001472_100 Hb_004449_170 Hb_004449_170 Hb_002477_300--Hb_004449_170 Hb_002477_300--Hb_146673_010 Hb_000465_090 Hb_000465_090 Hb_002477_300--Hb_000465_090 Hb_001329_290 Hb_001329_290 Hb_002477_300--Hb_001329_290 Hb_001012_010 Hb_001012_010 Hb_002477_300--Hb_001012_010 Hb_000633_020 Hb_000633_020 Hb_146673_010--Hb_000633_020 Hb_146673_010--Hb_000465_090 Hb_002946_190 Hb_002946_190 Hb_146673_010--Hb_002946_190 Hb_003077_020 Hb_003077_020 Hb_146673_010--Hb_003077_020 Hb_000976_120 Hb_000976_120 Hb_001472_100--Hb_000976_120 Hb_002553_060 Hb_002553_060 Hb_001472_100--Hb_002553_060 Hb_000110_310 Hb_000110_310 Hb_001472_100--Hb_000110_310 Hb_001472_100--Hb_107879_010 Hb_000270_680 Hb_000270_680 Hb_001472_100--Hb_000270_680 Hb_003207_180 Hb_003207_180 Hb_001472_100--Hb_003207_180 Hb_001922_170 Hb_001922_170 Hb_006570_140--Hb_001922_170 Hb_000035_500 Hb_000035_500 Hb_006570_140--Hb_000035_500 Hb_000094_330 Hb_000094_330 Hb_006570_140--Hb_000094_330 Hb_005847_060 Hb_005847_060 Hb_006570_140--Hb_005847_060 Hb_001662_150 Hb_001662_150 Hb_006570_140--Hb_001662_150 Hb_000185_050--Hb_001472_100 Hb_000185_050--Hb_002946_190 Hb_111036_010 Hb_111036_010 Hb_000185_050--Hb_111036_010 Hb_000690_190 Hb_000690_190 Hb_000185_050--Hb_000690_190 Hb_003942_020 Hb_003942_020 Hb_000185_050--Hb_003942_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.66624 1.55301 8.74785 3.30527 4.32898 4.46257
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.3148 7.43846 3.03641 4.99936 4.32226

CAGE analysis