Hb_001863_380

Information

Type -
Description -
Location Contig1863: 331846-334990
Sequence    

Annotation

kegg
ID rcu:RCOM_1035790
description 14-3-3 protein, putative
nr
ID XP_012067879.1
description PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
swissprot
ID P93212
description 14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2
trembl
ID A0A067KYZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15794 PE=3 SV=1
Gene Ontology
ID GO:0019904
description 14-3-3-like partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18364: 331855-335732
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_380 0.0 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
2 Hb_000413_240 0.0686439637 - - PREDICTED: transcription factor ILR3-like isoform X2 [Jatropha curcas]
3 Hb_002946_190 0.0690976472 - - PREDICTED: nudix hydrolase 26, chloroplastic [Jatropha curcas]
4 Hb_002343_040 0.0702245015 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic isoform X1 [Jatropha curcas]
5 Hb_012565_070 0.0757306662 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
6 Hb_000373_050 0.0770010529 - - PREDICTED: protein WHI3 [Jatropha curcas]
7 Hb_002759_190 0.0782631612 - - PREDICTED: protein NLRC3 [Jatropha curcas]
8 Hb_001105_170 0.0786035562 - - PREDICTED: uncharacterized protein LOC105642727 isoform X1 [Jatropha curcas]
9 Hb_006132_090 0.0796987755 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
10 Hb_004807_020 0.0801422228 - - PREDICTED: transcription initiation factor TFIID subunit 14b-like [Jatropha curcas]
11 Hb_004041_020 0.0818634301 - - ATP synthase D chain, mitochondrial, putative [Ricinus communis]
12 Hb_000163_100 0.0832462481 - - PREDICTED: uncharacterized protein LOC105642537 [Jatropha curcas]
13 Hb_002163_050 0.0839885963 - - hypothetical protein POPTR_0014s15490g [Populus trichocarpa]
14 Hb_000260_630 0.0842979248 - - PREDICTED: altered inheritance rate of mitochondria protein 25 isoform X1 [Jatropha curcas]
15 Hb_003861_060 0.0843007712 - - PREDICTED: treacle protein [Jatropha curcas]
16 Hb_000300_260 0.0844193323 - - PREDICTED: replication factor C subunit 3 [Jatropha curcas]
17 Hb_000012_250 0.0851989069 - - hypothetical protein L484_019524 [Morus notabilis]
18 Hb_003728_060 0.0859037425 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Jatropha curcas]
19 Hb_003124_150 0.0883642284 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like [Jatropha curcas]
20 Hb_001472_100 0.0886881213 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]

Gene co-expression network

sample Hb_001863_380 Hb_001863_380 Hb_000413_240 Hb_000413_240 Hb_001863_380--Hb_000413_240 Hb_002946_190 Hb_002946_190 Hb_001863_380--Hb_002946_190 Hb_002343_040 Hb_002343_040 Hb_001863_380--Hb_002343_040 Hb_012565_070 Hb_012565_070 Hb_001863_380--Hb_012565_070 Hb_000373_050 Hb_000373_050 Hb_001863_380--Hb_000373_050 Hb_002759_190 Hb_002759_190 Hb_001863_380--Hb_002759_190 Hb_000163_100 Hb_000163_100 Hb_000413_240--Hb_000163_100 Hb_000390_090 Hb_000390_090 Hb_000413_240--Hb_000390_090 Hb_004041_020 Hb_004041_020 Hb_000413_240--Hb_004041_020 Hb_000413_060 Hb_000413_060 Hb_000413_240--Hb_000413_060 Hb_000413_240--Hb_002946_190 Hb_002946_190--Hb_004041_020 Hb_000690_190 Hb_000690_190 Hb_002946_190--Hb_000690_190 Hb_146673_010 Hb_146673_010 Hb_002946_190--Hb_146673_010 Hb_001472_100 Hb_001472_100 Hb_002946_190--Hb_001472_100 Hb_012340_090 Hb_012340_090 Hb_002343_040--Hb_012340_090 Hb_001105_170 Hb_001105_170 Hb_002343_040--Hb_001105_170 Hb_146255_020 Hb_146255_020 Hb_002343_040--Hb_146255_020 Hb_004807_020 Hb_004807_020 Hb_002343_040--Hb_004807_020 Hb_001025_090 Hb_001025_090 Hb_002343_040--Hb_001025_090 Hb_000300_260 Hb_000300_260 Hb_012565_070--Hb_000300_260 Hb_003848_040 Hb_003848_040 Hb_012565_070--Hb_003848_040 Hb_000457_180 Hb_000457_180 Hb_012565_070--Hb_000457_180 Hb_002307_180 Hb_002307_180 Hb_012565_070--Hb_002307_180 Hb_012565_070--Hb_001105_170 Hb_003647_140 Hb_003647_140 Hb_000373_050--Hb_003647_140 Hb_007254_020 Hb_007254_020 Hb_000373_050--Hb_007254_020 Hb_000976_120 Hb_000976_120 Hb_000373_050--Hb_000976_120 Hb_014834_150 Hb_014834_150 Hb_000373_050--Hb_014834_150 Hb_000270_310 Hb_000270_310 Hb_000373_050--Hb_000270_310 Hb_003747_230 Hb_003747_230 Hb_002759_190--Hb_003747_230 Hb_000012_250 Hb_000012_250 Hb_002759_190--Hb_000012_250 Hb_005494_010 Hb_005494_010 Hb_002759_190--Hb_005494_010 Hb_000227_170 Hb_000227_170 Hb_002759_190--Hb_000227_170 Hb_001900_140 Hb_001900_140 Hb_002759_190--Hb_001900_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
90.2533 74.3548 229.342 105.79 82.1641 76.1204
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
114.797 187.553 112.898 88.4476 117.001

CAGE analysis