Hb_000163_100

Information

Type -
Description -
Location Contig163: 66439-68819
Sequence    

Annotation

kegg
ID cic:CICLE_v10021225mg
description hypothetical protein
nr
ID XP_012082782.1
description PREDICTED: uncharacterized protein LOC105642537 [Jatropha curcas]
swissprot
ID A0QM57
description Putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4873 OS=Mycobacterium avium (strain 104) GN=MAV_4873 PE=3 SV=1
trembl
ID A0A067K7D9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13941 PE=4 SV=1
Gene Ontology
ID GO:0008168
description s-adenosyl-l-methionine-dependent methyltransferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14808: 67663-68963
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000163_100 0.0 - - PREDICTED: uncharacterized protein LOC105642537 [Jatropha curcas]
2 Hb_000413_240 0.0572051187 - - PREDICTED: transcription factor ILR3-like isoform X2 [Jatropha curcas]
3 Hb_000413_060 0.0673220792 - - PREDICTED: DAG protein, chloroplastic [Populus euphratica]
4 Hb_001863_380 0.0832462481 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
5 Hb_002946_190 0.0896769276 - - PREDICTED: nudix hydrolase 26, chloroplastic [Jatropha curcas]
6 Hb_000012_250 0.0903683998 - - hypothetical protein L484_019524 [Morus notabilis]
7 Hb_000429_040 0.0916809765 - - PREDICTED: chaperone protein dnaJ 6 [Vitis vinifera]
8 Hb_000390_090 0.0924932087 - - PREDICTED: uncharacterized protein LOC105632476 [Jatropha curcas]
9 Hb_004041_020 0.0947280123 - - ATP synthase D chain, mitochondrial, putative [Ricinus communis]
10 Hb_004440_020 0.1016993314 - - AP-3 complex subunit sigma-1, putative [Ricinus communis]
11 Hb_001946_140 0.1037870489 - - PREDICTED: heme oxygenase 1, chloroplastic-like [Jatropha curcas]
12 Hb_000003_780 0.1057852554 - - hexokinase [Manihot esculenta]
13 Hb_002343_040 0.1083543776 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic isoform X1 [Jatropha curcas]
14 Hb_002759_190 0.1087513825 - - PREDICTED: protein NLRC3 [Jatropha curcas]
15 Hb_011053_010 0.1088100039 - - PREDICTED: uncharacterized protein LOC105631146 [Jatropha curcas]
16 Hb_001804_090 0.1093404793 - - PREDICTED: uracil phosphoribosyltransferase isoform X1 [Jatropha curcas]
17 Hb_001105_170 0.1110187853 - - PREDICTED: uncharacterized protein LOC105642727 isoform X1 [Jatropha curcas]
18 Hb_001541_110 0.1116896549 - - PREDICTED: sufE-like protein 2, chloroplastic isoform X2 [Jatropha curcas]
19 Hb_006132_090 0.1131634541 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
20 Hb_003077_020 0.1135488289 - - ABC transporter family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000163_100 Hb_000163_100 Hb_000413_240 Hb_000413_240 Hb_000163_100--Hb_000413_240 Hb_000413_060 Hb_000413_060 Hb_000163_100--Hb_000413_060 Hb_001863_380 Hb_001863_380 Hb_000163_100--Hb_001863_380 Hb_002946_190 Hb_002946_190 Hb_000163_100--Hb_002946_190 Hb_000012_250 Hb_000012_250 Hb_000163_100--Hb_000012_250 Hb_000429_040 Hb_000429_040 Hb_000163_100--Hb_000429_040 Hb_000413_240--Hb_001863_380 Hb_000390_090 Hb_000390_090 Hb_000413_240--Hb_000390_090 Hb_004041_020 Hb_004041_020 Hb_000413_240--Hb_004041_020 Hb_000413_240--Hb_000413_060 Hb_000413_240--Hb_002946_190 Hb_003556_030 Hb_003556_030 Hb_000413_060--Hb_003556_030 Hb_000413_060--Hb_000390_090 Hb_011053_010 Hb_011053_010 Hb_000413_060--Hb_011053_010 Hb_001541_110 Hb_001541_110 Hb_000413_060--Hb_001541_110 Hb_001863_380--Hb_002946_190 Hb_002343_040 Hb_002343_040 Hb_001863_380--Hb_002343_040 Hb_012565_070 Hb_012565_070 Hb_001863_380--Hb_012565_070 Hb_000373_050 Hb_000373_050 Hb_001863_380--Hb_000373_050 Hb_002759_190 Hb_002759_190 Hb_001863_380--Hb_002759_190 Hb_002946_190--Hb_004041_020 Hb_000690_190 Hb_000690_190 Hb_002946_190--Hb_000690_190 Hb_146673_010 Hb_146673_010 Hb_002946_190--Hb_146673_010 Hb_001472_100 Hb_001472_100 Hb_002946_190--Hb_001472_100 Hb_000012_250--Hb_002759_190 Hb_000731_160 Hb_000731_160 Hb_000012_250--Hb_000731_160 Hb_000012_250--Hb_001863_380 Hb_107879_010 Hb_107879_010 Hb_000012_250--Hb_107879_010 Hb_000012_250--Hb_001472_100 Hb_000832_190 Hb_000832_190 Hb_000429_040--Hb_000832_190 Hb_000429_040--Hb_004041_020 Hb_001377_450 Hb_001377_450 Hb_000429_040--Hb_001377_450 Hb_000429_040--Hb_000413_240 Hb_004984_030 Hb_004984_030 Hb_000429_040--Hb_004984_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.17867 0.95456 6.59833 2.39948 1.34175 2.1178
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.54624 4.673 2.5351 1.63838 3.04708

CAGE analysis