Hb_001377_450

Information

Type -
Description -
Location Contig1377: 404263-407605
Sequence    

Annotation

kegg
ID pop:POPTR_0002s17450g
description POPTRDRAFT_644606; pyridoxine 5'-phosphate oxidase-related family protein
nr
ID XP_012083170.1
description PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9ZPY1
description Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Arabidopsis thaliana GN=PPOX2 PE=1 SV=2
trembl
ID A0A067K081
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14234 PE=4 SV=1
Gene Ontology
ID GO:0004733
description pyridoxine pyridoxamine 5 -phosphate oxidase 2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10444: 406384-407150 , PASA_asmbl_10445: 404394-407490
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001377_450 0.0 - - PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Jatropha curcas]
2 Hb_000429_040 0.089880216 - - PREDICTED: chaperone protein dnaJ 6 [Vitis vinifera]
3 Hb_000832_190 0.0997070529 - - Rab3 [Hevea brasiliensis]
4 Hb_015299_030 0.0997877044 - - PREDICTED: proteasome subunit alpha type-7 [Jatropha curcas]
5 Hb_028396_010 0.101208806 - - PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera]
6 Hb_007894_170 0.1026584407 - - PREDICTED: UPF0136 membrane protein At2g26240-like [Jatropha curcas]
7 Hb_001073_080 0.1036724712 - - PREDICTED: protein root UVB sensitive 2, chloroplastic [Jatropha curcas]
8 Hb_005460_060 0.1037995289 - - PREDICTED: proteasome assembly chaperone 2 [Jatropha curcas]
9 Hb_004984_030 0.1057255447 - - protein with unknown function [Ricinus communis]
10 Hb_003362_030 0.106420776 - - hypothetical protein POPTR_0017s08440g [Populus trichocarpa]
11 Hb_004041_020 0.1065640441 - - ATP synthase D chain, mitochondrial, putative [Ricinus communis]
12 Hb_000359_150 0.1077741525 - - PREDICTED: protein Mpv17-like isoform X1 [Jatropha curcas]
13 Hb_000392_340 0.1088156765 - - PREDICTED: vacuolar protein sorting-associated protein 29 [Jatropha curcas]
14 Hb_000946_090 0.1100192263 - - PREDICTED: cyclin-C1-2-like isoform X2 [Jatropha curcas]
15 Hb_131181_010 0.1102985362 - - transcription initiation factor iia (tfiia), gamma chain, putative [Ricinus communis]
16 Hb_000599_260 0.1106428387 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
17 Hb_001019_150 0.1110585144 - - Acyl-protein thioesterase, putative [Ricinus communis]
18 Hb_011330_020 0.1110908185 transcription factor TF Family: ARID transcription factor, putative [Ricinus communis]
19 Hb_003126_130 0.1118480312 - - inositol-1-monophosphatase family protein [Populus trichocarpa]
20 Hb_000457_180 0.1126058207 - - PREDICTED: cytochrome c1-2, heme protein, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_001377_450 Hb_001377_450 Hb_000429_040 Hb_000429_040 Hb_001377_450--Hb_000429_040 Hb_000832_190 Hb_000832_190 Hb_001377_450--Hb_000832_190 Hb_015299_030 Hb_015299_030 Hb_001377_450--Hb_015299_030 Hb_028396_010 Hb_028396_010 Hb_001377_450--Hb_028396_010 Hb_007894_170 Hb_007894_170 Hb_001377_450--Hb_007894_170 Hb_001073_080 Hb_001073_080 Hb_001377_450--Hb_001073_080 Hb_000429_040--Hb_000832_190 Hb_004041_020 Hb_004041_020 Hb_000429_040--Hb_004041_020 Hb_000413_240 Hb_000413_240 Hb_000429_040--Hb_000413_240 Hb_000163_100 Hb_000163_100 Hb_000429_040--Hb_000163_100 Hb_004984_030 Hb_004984_030 Hb_000429_040--Hb_004984_030 Hb_000832_190--Hb_004984_030 Hb_000832_190--Hb_004041_020 Hb_000926_200 Hb_000926_200 Hb_000832_190--Hb_000926_200 Hb_004965_110 Hb_004965_110 Hb_000832_190--Hb_004965_110 Hb_000832_190--Hb_000413_240 Hb_001188_030 Hb_001188_030 Hb_015299_030--Hb_001188_030 Hb_001431_080 Hb_001431_080 Hb_015299_030--Hb_001431_080 Hb_002811_170 Hb_002811_170 Hb_015299_030--Hb_002811_170 Hb_000946_090 Hb_000946_090 Hb_015299_030--Hb_000946_090 Hb_001931_010 Hb_001931_010 Hb_015299_030--Hb_001931_010 Hb_098315_020 Hb_098315_020 Hb_015299_030--Hb_098315_020 Hb_000045_310 Hb_000045_310 Hb_028396_010--Hb_000045_310 Hb_008071_020 Hb_008071_020 Hb_028396_010--Hb_008071_020 Hb_001341_150 Hb_001341_150 Hb_028396_010--Hb_001341_150 Hb_028396_010--Hb_001931_010 Hb_000189_240 Hb_000189_240 Hb_028396_010--Hb_000189_240 Hb_001279_080 Hb_001279_080 Hb_028396_010--Hb_001279_080 Hb_007894_170--Hb_028396_010 Hb_003041_050 Hb_003041_050 Hb_007894_170--Hb_003041_050 Hb_000538_120 Hb_000538_120 Hb_007894_170--Hb_000538_120 Hb_007894_170--Hb_000045_310 Hb_001301_110 Hb_001301_110 Hb_007894_170--Hb_001301_110 Hb_007894_060 Hb_007894_060 Hb_007894_170--Hb_007894_060 Hb_007894_050 Hb_007894_050 Hb_001073_080--Hb_007894_050 Hb_000390_090 Hb_000390_090 Hb_001073_080--Hb_000390_090 Hb_001301_340 Hb_001301_340 Hb_001073_080--Hb_001301_340 Hb_000160_180 Hb_000160_180 Hb_001073_080--Hb_000160_180 Hb_001073_080--Hb_000429_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.33913 2.76765 14.3049 12.7731 3.16072 4.67556
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.4118 16.6576 6.1913 6.47895 6.14446

CAGE analysis