Hb_001931_010

Information

Type -
Description -
Location Contig1931: 69743-80413
Sequence    

Annotation

kegg
ID rcu:RCOM_0737910
description NADH-cytochrome B5 reductase, putative (EC:1.6.2.2)
nr
ID XP_012066294.1
description PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
swissprot
ID Q9ZNT1
description NADH--cytochrome b5 reductase 1 OS=Arabidopsis thaliana GN=CBR1 PE=1 SV=1
trembl
ID A0A067L6P9
description NADH-cytochrome b5 reductase OS=Jatropha curcas GN=JCGZ_23855 PE=3 SV=1
Gene Ontology
ID GO:0004128
description nadh--cytochrome b5 reductase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19288: 69792-79948 , PASA_asmbl_19290: 77505-77711
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001931_010 0.0 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
2 Hb_008071_020 0.0493646043 - - PREDICTED: serine/threonine-protein kinase AFC1 [Jatropha curcas]
3 Hb_006326_040 0.0505426174 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001341_150 0.053311539 - - PREDICTED: proteasome subunit beta type-4-like [Jatropha curcas]
5 Hb_000505_130 0.0571900701 - - PREDICTED: uncharacterized protein LOC105641262 isoform X1 [Jatropha curcas]
6 Hb_000566_120 0.060020666 - - PREDICTED: uncharacterized protein LOC105123035 isoform X1 [Populus euphratica]
7 Hb_001279_080 0.060199574 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105140180 isoform X1 [Populus euphratica]
8 Hb_006573_190 0.064362311 - - PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Jatropha curcas]
9 Hb_000045_310 0.0666755916 - - PREDICTED: probable signal peptidase complex subunit 2 [Jatropha curcas]
10 Hb_002171_060 0.0676317871 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003582_060 0.0679534193 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
12 Hb_000390_300 0.06858203 transcription factor TF Family: GNAT PREDICTED: histone acetyltransferase MCC1 [Jatropha curcas]
13 Hb_028396_010 0.0686444925 - - PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera]
14 Hb_000310_020 0.0695980409 - - hypothetical protein JCGZ_20797 [Jatropha curcas]
15 Hb_002811_170 0.0698594971 - - PREDICTED: 40S ribosomal protein S3a-1 [Jatropha curcas]
16 Hb_000946_090 0.0698609172 - - PREDICTED: cyclin-C1-2-like isoform X2 [Jatropha curcas]
17 Hb_006615_240 0.0701399635 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
18 Hb_000599_260 0.0723687129 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
19 Hb_017895_040 0.0741231099 - - hypothetical protein POPTR_0006s08120g [Populus trichocarpa]
20 Hb_000261_160 0.0754323326 - - PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001931_010 Hb_001931_010 Hb_008071_020 Hb_008071_020 Hb_001931_010--Hb_008071_020 Hb_006326_040 Hb_006326_040 Hb_001931_010--Hb_006326_040 Hb_001341_150 Hb_001341_150 Hb_001931_010--Hb_001341_150 Hb_000505_130 Hb_000505_130 Hb_001931_010--Hb_000505_130 Hb_000566_120 Hb_000566_120 Hb_001931_010--Hb_000566_120 Hb_001279_080 Hb_001279_080 Hb_001931_010--Hb_001279_080 Hb_008071_020--Hb_001279_080 Hb_028396_010 Hb_028396_010 Hb_008071_020--Hb_028396_010 Hb_026053_020 Hb_026053_020 Hb_008071_020--Hb_026053_020 Hb_008071_020--Hb_006326_040 Hb_000045_310 Hb_000045_310 Hb_008071_020--Hb_000045_310 Hb_004889_020 Hb_004889_020 Hb_006326_040--Hb_004889_020 Hb_006326_040--Hb_000505_130 Hb_006326_040--Hb_000566_120 Hb_006326_040--Hb_028396_010 Hb_010098_050 Hb_010098_050 Hb_001341_150--Hb_010098_050 Hb_006615_240 Hb_006615_240 Hb_001341_150--Hb_006615_240 Hb_000457_180 Hb_000457_180 Hb_001341_150--Hb_000457_180 Hb_002078_140 Hb_002078_140 Hb_001341_150--Hb_002078_140 Hb_001341_150--Hb_028396_010 Hb_000310_020 Hb_000310_020 Hb_000505_130--Hb_000310_020 Hb_000221_190 Hb_000221_190 Hb_000505_130--Hb_000221_190 Hb_044653_040 Hb_044653_040 Hb_000505_130--Hb_044653_040 Hb_003124_150 Hb_003124_150 Hb_000505_130--Hb_003124_150 Hb_000566_120--Hb_000045_310 Hb_006573_190 Hb_006573_190 Hb_000566_120--Hb_006573_190 Hb_012799_170 Hb_012799_170 Hb_000566_120--Hb_012799_170 Hb_010361_010 Hb_010361_010 Hb_000566_120--Hb_010361_010 Hb_000390_300 Hb_000390_300 Hb_000566_120--Hb_000390_300 Hb_018133_020 Hb_018133_020 Hb_001279_080--Hb_018133_020 Hb_000431_070 Hb_000431_070 Hb_001279_080--Hb_000431_070 Hb_001279_080--Hb_000045_310 Hb_001279_080--Hb_000566_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.5536 13.6976 31.7175 29.6809 15.1814 17.229
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
28.0838 53.2979 24.749 20.0163 21.1969

CAGE analysis