Hb_026053_020

Information

Type -
Description -
Location Contig26053: 21073-31317
Sequence    

Annotation

kegg
ID cic:CICLE_v10009500mg
description hypothetical protein
nr
ID XP_012084304.1
description PREDICTED: uncharacterized protein LOC105643718 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JV65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19791 PE=4 SV=1
Gene Ontology
ID GO:0001671
description chaperone activators

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27166: 21201-31281
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026053_020 0.0 - - PREDICTED: uncharacterized protein LOC105643718 [Jatropha curcas]
2 Hb_131181_010 0.0590627886 - - transcription initiation factor iia (tfiia), gamma chain, putative [Ricinus communis]
3 Hb_000189_240 0.0610429225 - - PREDICTED: PITH domain-containing protein At3g04780 [Jatropha curcas]
4 Hb_008071_020 0.0629831833 - - PREDICTED: serine/threonine-protein kinase AFC1 [Jatropha curcas]
5 Hb_000996_140 0.0648990574 - - PREDICTED: EKC/KEOPS complex subunit Tprkb [Jatropha curcas]
6 Hb_018133_020 0.0666984936 - - transporter, putative [Ricinus communis]
7 Hb_001141_140 0.0707534889 - - 20S proteasome beta subunit D3 [Hevea brasiliensis]
8 Hb_010175_040 0.0707940433 - - PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Jatropha curcas]
9 Hb_007441_330 0.0713159128 - - PREDICTED: acyl carrier protein 1, mitochondrial [Jatropha curcas]
10 Hb_001279_080 0.0724261194 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105140180 isoform X1 [Populus euphratica]
11 Hb_000840_180 0.0759983167 - - protein BOLA2 [Jatropha curcas]
12 Hb_004057_010 0.076899903 - - PREDICTED: uncharacterized protein LOC105649313 [Jatropha curcas]
13 Hb_000571_020 0.0771575027 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]
14 Hb_003018_010 0.0797628875 - - PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Jatropha curcas]
15 Hb_003018_020 0.0800487218 - - PREDICTED: uncharacterized protein LOC105628697 [Jatropha curcas]
16 Hb_001484_070 0.0803198636 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000035_370 0.0806607498 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001329_150 0.0816998649 - - PREDICTED: autophagy-related protein 8i-like [Jatropha curcas]
19 Hb_000261_140 0.0820389812 - - -
20 Hb_003226_100 0.0820495811 - - PREDICTED: 60S ribosomal protein L18-2 [Jatropha curcas]

Gene co-expression network

sample Hb_026053_020 Hb_026053_020 Hb_131181_010 Hb_131181_010 Hb_026053_020--Hb_131181_010 Hb_000189_240 Hb_000189_240 Hb_026053_020--Hb_000189_240 Hb_008071_020 Hb_008071_020 Hb_026053_020--Hb_008071_020 Hb_000996_140 Hb_000996_140 Hb_026053_020--Hb_000996_140 Hb_018133_020 Hb_018133_020 Hb_026053_020--Hb_018133_020 Hb_001141_140 Hb_001141_140 Hb_026053_020--Hb_001141_140 Hb_131181_010--Hb_018133_020 Hb_000160_180 Hb_000160_180 Hb_131181_010--Hb_000160_180 Hb_001279_080 Hb_001279_080 Hb_131181_010--Hb_001279_080 Hb_001318_260 Hb_001318_260 Hb_131181_010--Hb_001318_260 Hb_001329_150 Hb_001329_150 Hb_131181_010--Hb_001329_150 Hb_000826_100 Hb_000826_100 Hb_000189_240--Hb_000826_100 Hb_002000_140 Hb_002000_140 Hb_000189_240--Hb_002000_140 Hb_003605_160 Hb_003605_160 Hb_000189_240--Hb_003605_160 Hb_002303_060 Hb_002303_060 Hb_000189_240--Hb_002303_060 Hb_000189_240--Hb_008071_020 Hb_001931_010 Hb_001931_010 Hb_008071_020--Hb_001931_010 Hb_008071_020--Hb_001279_080 Hb_028396_010 Hb_028396_010 Hb_008071_020--Hb_028396_010 Hb_006326_040 Hb_006326_040 Hb_008071_020--Hb_006326_040 Hb_000045_310 Hb_000045_310 Hb_008071_020--Hb_000045_310 Hb_007441_330 Hb_007441_330 Hb_000996_140--Hb_007441_330 Hb_010175_040 Hb_010175_040 Hb_000996_140--Hb_010175_040 Hb_003226_100 Hb_003226_100 Hb_000996_140--Hb_003226_100 Hb_002768_030 Hb_002768_030 Hb_000996_140--Hb_002768_030 Hb_003018_010 Hb_003018_010 Hb_000996_140--Hb_003018_010 Hb_018133_020--Hb_001279_080 Hb_018133_020--Hb_001318_260 Hb_012114_070 Hb_012114_070 Hb_018133_020--Hb_012114_070 Hb_000840_180 Hb_000840_180 Hb_018133_020--Hb_000840_180 Hb_006925_040 Hb_006925_040 Hb_001141_140--Hb_006925_040 Hb_000735_040 Hb_000735_040 Hb_001141_140--Hb_000735_040 Hb_001141_140--Hb_010175_040 Hb_001141_140--Hb_003226_100 Hb_007044_130 Hb_007044_130 Hb_001141_140--Hb_007044_130 Hb_003018_020 Hb_003018_020 Hb_001141_140--Hb_003018_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.9872 10.1637 29.5135 25.3301 13.1065 16.4415
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.81 68.6274 28.7233 17.0087 18.5962

CAGE analysis