Hb_000297_160

Information

Type -
Description -
Location Contig297: 176359-179388
Sequence    

Annotation

kegg
ID cit:102615239
description alpha/beta hydrolase domain-containing protein 11-like
nr
ID XP_012073000.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
swissprot
ID Q8K4F5
description Alpha/beta hydrolase domain-containing protein 11 OS=Mus musculus GN=Abhd11 PE=1 SV=1
trembl
ID A0A067KM72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06785 PE=4 SV=1
Gene Ontology
ID GO:0005739
description alpha beta hydrolase domain-containing protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31101: 176433-179305 , PASA_asmbl_31103: 176837-179158
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000297_160 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
2 Hb_000875_080 0.0637406889 - - PREDICTED: (+)-delta-cadinene synthase isozyme XC14-like isoform X2 [Gossypium raimondii]
3 Hb_000270_680 0.0638435275 - - hypothetical protein POPTR_0015s08420g [Populus trichocarpa]
4 Hb_000336_210 0.067808483 - - PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
5 Hb_001959_110 0.0709674027 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
6 Hb_005144_090 0.0713533406 - - PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Citrus sinensis]
7 Hb_002272_050 0.0718961273 - - microsomal signal peptidase 23 kD subunit, putative [Ricinus communis]
8 Hb_001268_240 0.0750828793 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
9 Hb_000816_250 0.0761724705 - - PREDICTED: uncharacterized protein LOC105649197 isoform X1 [Jatropha curcas]
10 Hb_001472_100 0.0766502836 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
11 Hb_000270_310 0.076685202 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Populus euphratica]
12 Hb_000049_140 0.0777156689 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Jatropha curcas]
13 Hb_000649_230 0.0778178334 - - PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Jatropha curcas]
14 Hb_000086_170 0.0785249761 - - PREDICTED: serine/threonine-protein kinase 19 [Jatropha curcas]
15 Hb_014834_150 0.0793510775 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 1, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_000905_110 0.0806520215 - - arginine/serine rich splicing factor sf4/14, putative [Ricinus communis]
17 Hb_002936_010 0.0813513197 - - PREDICTED: uncharacterized protein LOC103949110 [Pyrus x bretschneideri]
18 Hb_161574_020 0.0816974609 - - PREDICTED: ubiquitin fusion degradation protein 1 homolog [Jatropha curcas]
19 Hb_005271_040 0.0819910196 - - PREDICTED: serine racemase [Jatropha curcas]
20 Hb_003185_010 0.0820597119 - - PREDICTED: V-type proton ATPase subunit c''1 [Jatropha curcas]

Gene co-expression network

sample Hb_000297_160 Hb_000297_160 Hb_000875_080 Hb_000875_080 Hb_000297_160--Hb_000875_080 Hb_000270_680 Hb_000270_680 Hb_000297_160--Hb_000270_680 Hb_000336_210 Hb_000336_210 Hb_000297_160--Hb_000336_210 Hb_001959_110 Hb_001959_110 Hb_000297_160--Hb_001959_110 Hb_005144_090 Hb_005144_090 Hb_000297_160--Hb_005144_090 Hb_002272_050 Hb_002272_050 Hb_000297_160--Hb_002272_050 Hb_000875_080--Hb_000336_210 Hb_000875_080--Hb_002272_050 Hb_000049_140 Hb_000049_140 Hb_000875_080--Hb_000049_140 Hb_005271_040 Hb_005271_040 Hb_000875_080--Hb_005271_040 Hb_171900_090 Hb_171900_090 Hb_000875_080--Hb_171900_090 Hb_000007_390 Hb_000007_390 Hb_000270_680--Hb_000007_390 Hb_000110_310 Hb_000110_310 Hb_000270_680--Hb_000110_310 Hb_107879_010 Hb_107879_010 Hb_000270_680--Hb_107879_010 Hb_003943_050 Hb_003943_050 Hb_000270_680--Hb_003943_050 Hb_001472_100 Hb_001472_100 Hb_000270_680--Hb_001472_100 Hb_000905_110 Hb_000905_110 Hb_000336_210--Hb_000905_110 Hb_014834_150 Hb_014834_150 Hb_000336_210--Hb_014834_150 Hb_000336_210--Hb_002272_050 Hb_000336_210--Hb_171900_090 Hb_000313_220 Hb_000313_220 Hb_001959_110--Hb_000313_220 Hb_000976_140 Hb_000976_140 Hb_001959_110--Hb_000976_140 Hb_000331_090 Hb_000331_090 Hb_001959_110--Hb_000331_090 Hb_163175_010 Hb_163175_010 Hb_001959_110--Hb_163175_010 Hb_000035_470 Hb_000035_470 Hb_001959_110--Hb_000035_470 Hb_001922_150 Hb_001922_150 Hb_001959_110--Hb_001922_150 Hb_011618_050 Hb_011618_050 Hb_005144_090--Hb_011618_050 Hb_005144_090--Hb_000049_140 Hb_000417_130 Hb_000417_130 Hb_005144_090--Hb_000417_130 Hb_002013_020 Hb_002013_020 Hb_005144_090--Hb_002013_020 Hb_123915_040 Hb_123915_040 Hb_005144_090--Hb_123915_040 Hb_002272_050--Hb_171900_090 Hb_000359_040 Hb_000359_040 Hb_002272_050--Hb_000359_040 Hb_002272_050--Hb_005271_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.15809 3.78629 9.3192 8.02669 6.26079 4.97995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.81316 9.11423 4.43162 6.38437 4.86566

CAGE analysis