Hb_001632_030

Information

Type -
Description -
Location Contig1632: 40604-44091
Sequence    

Annotation

kegg
ID rcu:RCOM_1469930
description chaperone clpb, putative
nr
ID XP_012080363.1
description PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
swissprot
ID P42730
description Chaperone protein ClpB1 OS=Arabidopsis thaliana GN=CLPB1 PE=1 SV=2
trembl
ID A0A067K8K0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11709 PE=3 SV=1
Gene Ontology
ID GO:0005524
description chaperone protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001632_030 0.0 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
2 Hb_000613_150 0.2326599521 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
3 Hb_012163_030 0.2708050751 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
4 Hb_185224_010 0.2716034043 - - zinc finger protein, putative [Ricinus communis]
5 Hb_003124_180 0.2748074216 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_026740_010 0.2758063118 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
7 Hb_000317_530 0.2777509742 - - hypothetical protein, partial [Pseudomonas fluorescens]
8 Hb_004129_160 0.2793201232 - - small heat-shock protein, putative [Ricinus communis]
9 Hb_156850_060 0.2885489682 - - PREDICTED: uncharacterized protein LOC105635248 [Jatropha curcas]
10 Hb_008215_030 0.2892211734 - - hypothetical protein 3 [Hevea brasiliensis]
11 Hb_000152_100 0.2899565132 - - PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Jatropha curcas]
12 Hb_007313_080 0.2923209581 - - hypothetical protein CICLE_v10002804mg [Citrus clementina]
13 Hb_001332_030 0.2927007523 - - hypothetical protein JCGZ_21111 [Jatropha curcas]
14 Hb_004931_010 0.2992947876 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
15 Hb_004679_060 0.2998691361 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001059_120 0.3003054798 - - NADH dehydrogenase, putative [Ricinus communis]
17 Hb_015430_010 0.3004290384 - - PREDICTED: uncharacterized protein LOC105125506 isoform X2 [Populus euphratica]
18 Hb_005144_070 0.302089907 - - conserved hypothetical protein [Ricinus communis]
19 Hb_007218_100 0.3046991298 - - phosphofructokinase [Hevea brasiliensis]
20 Hb_003376_290 0.3048482639 - - hypothetical protein POPTR_0010s22880g [Populus trichocarpa]

Gene co-expression network

sample Hb_001632_030 Hb_001632_030 Hb_000613_150 Hb_000613_150 Hb_001632_030--Hb_000613_150 Hb_012163_030 Hb_012163_030 Hb_001632_030--Hb_012163_030 Hb_185224_010 Hb_185224_010 Hb_001632_030--Hb_185224_010 Hb_003124_180 Hb_003124_180 Hb_001632_030--Hb_003124_180 Hb_026740_010 Hb_026740_010 Hb_001632_030--Hb_026740_010 Hb_000317_530 Hb_000317_530 Hb_001632_030--Hb_000317_530 Hb_000613_150--Hb_000317_530 Hb_000613_150--Hb_012163_030 Hb_000402_110 Hb_000402_110 Hb_000613_150--Hb_000402_110 Hb_000613_150--Hb_003124_180 Hb_000613_150--Hb_026740_010 Hb_012163_030--Hb_000317_530 Hb_008954_010 Hb_008954_010 Hb_012163_030--Hb_008954_010 Hb_006588_010 Hb_006588_010 Hb_012163_030--Hb_006588_010 Hb_001348_110 Hb_001348_110 Hb_012163_030--Hb_001348_110 Hb_000804_030 Hb_000804_030 Hb_012163_030--Hb_000804_030 Hb_000200_200 Hb_000200_200 Hb_185224_010--Hb_000200_200 Hb_000031_080 Hb_000031_080 Hb_185224_010--Hb_000031_080 Hb_008215_030 Hb_008215_030 Hb_185224_010--Hb_008215_030 Hb_000340_500 Hb_000340_500 Hb_185224_010--Hb_000340_500 Hb_015430_010 Hb_015430_010 Hb_185224_010--Hb_015430_010 Hb_000173_050 Hb_000173_050 Hb_185224_010--Hb_000173_050 Hb_003124_180--Hb_000402_110 Hb_002701_190 Hb_002701_190 Hb_003124_180--Hb_002701_190 Hb_000890_090 Hb_000890_090 Hb_003124_180--Hb_000890_090 Hb_006655_040 Hb_006655_040 Hb_003124_180--Hb_006655_040 Hb_026740_010--Hb_000890_090 Hb_026740_010--Hb_012163_030 Hb_001911_070 Hb_001911_070 Hb_026740_010--Hb_001911_070 Hb_044555_010 Hb_044555_010 Hb_026740_010--Hb_044555_010 Hb_026740_010--Hb_000317_530 Hb_000062_410 Hb_000062_410 Hb_000317_530--Hb_000062_410 Hb_010422_080 Hb_010422_080 Hb_000317_530--Hb_010422_080 Hb_000031_040 Hb_000031_040 Hb_000317_530--Hb_000031_040 Hb_000487_280 Hb_000487_280 Hb_000317_530--Hb_000487_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.070271 0.00955469 0 0.00579216
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.090222 0.130162 0.0226224 0.0469419 0

CAGE analysis