Hb_000031_080

Information

Type -
Description -
Location Contig31: 76295-76660
Sequence    

Annotation

kegg
ID rcu:RCOM_0918640
description hypothetical protein
nr
ID XP_012076343.1
description PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07021 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000031_080 0.0 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
2 Hb_098533_020 0.1286178524 - - PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
3 Hb_009778_040 0.1422071052 - - PREDICTED: uncharacterized protein LOC105110611 [Populus euphratica]
4 Hb_002243_060 0.1474903859 - - hypothetical protein POPTR_0022s00750g [Populus trichocarpa]
5 Hb_000809_060 0.1547616029 transcription factor TF Family: LOB LOB domain-containing 36 -like protein [Gossypium arboreum]
6 Hb_002081_030 0.1585431094 - - unnamed protein product [Coffea canephora]
7 Hb_000465_510 0.1665920175 - - PREDICTED: GTP-binding protein YPTM2 [Populus euphratica]
8 Hb_000152_100 0.1674595486 - - PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Jatropha curcas]
9 Hb_000768_130 0.1688383597 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: protein TRI1 [Jatropha curcas]
10 Hb_001105_090 0.1712441387 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
11 Hb_007441_260 0.1721141084 - - PREDICTED: ATP synthase subunit delta', mitochondrial-like [Jatropha curcas]
12 Hb_000340_500 0.1726601186 - - PREDICTED: aldo-keto reductase-like [Jatropha curcas]
13 Hb_008226_080 0.1785521699 - - Protein LRP16, putative [Ricinus communis]
14 Hb_000178_120 0.1815322019 - - PREDICTED: histone H2B [Jatropha curcas]
15 Hb_000270_740 0.1824854458 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
16 Hb_015430_010 0.1829028732 - - PREDICTED: uncharacterized protein LOC105125506 isoform X2 [Populus euphratica]
17 Hb_007313_080 0.1843895239 - - hypothetical protein CICLE_v10002804mg [Citrus clementina]
18 Hb_001123_210 0.1844569814 - - PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]
19 Hb_020805_060 0.1849846157 - - PREDICTED: protein S-acyltransferase 21 [Jatropha curcas]
20 Hb_008215_030 0.1870979028 - - hypothetical protein 3 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000031_080 Hb_000031_080 Hb_098533_020 Hb_098533_020 Hb_000031_080--Hb_098533_020 Hb_009778_040 Hb_009778_040 Hb_000031_080--Hb_009778_040 Hb_002243_060 Hb_002243_060 Hb_000031_080--Hb_002243_060 Hb_000809_060 Hb_000809_060 Hb_000031_080--Hb_000809_060 Hb_002081_030 Hb_002081_030 Hb_000031_080--Hb_002081_030 Hb_000465_510 Hb_000465_510 Hb_000031_080--Hb_000465_510 Hb_000189_540 Hb_000189_540 Hb_098533_020--Hb_000189_540 Hb_098533_020--Hb_000465_510 Hb_000152_100 Hb_000152_100 Hb_098533_020--Hb_000152_100 Hb_000340_500 Hb_000340_500 Hb_098533_020--Hb_000340_500 Hb_005015_030 Hb_005015_030 Hb_098533_020--Hb_005015_030 Hb_009778_040--Hb_002081_030 Hb_002838_030 Hb_002838_030 Hb_009778_040--Hb_002838_030 Hb_001105_090 Hb_001105_090 Hb_009778_040--Hb_001105_090 Hb_003020_330 Hb_003020_330 Hb_009778_040--Hb_003020_330 Hb_006588_080 Hb_006588_080 Hb_009778_040--Hb_006588_080 Hb_120823_010 Hb_120823_010 Hb_009778_040--Hb_120823_010 Hb_007254_080 Hb_007254_080 Hb_002243_060--Hb_007254_080 Hb_000110_170 Hb_000110_170 Hb_002243_060--Hb_000110_170 Hb_002243_060--Hb_002081_030 Hb_002042_080 Hb_002042_080 Hb_002243_060--Hb_002042_080 Hb_000178_120 Hb_000178_120 Hb_002243_060--Hb_000178_120 Hb_147752_010 Hb_147752_010 Hb_002243_060--Hb_147752_010 Hb_000809_060--Hb_002081_030 Hb_000809_060--Hb_009778_040 Hb_007885_010 Hb_007885_010 Hb_000809_060--Hb_007885_010 Hb_004755_030 Hb_004755_030 Hb_000809_060--Hb_004755_030 Hb_005144_070 Hb_005144_070 Hb_000809_060--Hb_005144_070 Hb_076693_040 Hb_076693_040 Hb_000809_060--Hb_076693_040 Hb_000087_130 Hb_000087_130 Hb_002081_030--Hb_000087_130 Hb_001726_040 Hb_001726_040 Hb_002081_030--Hb_001726_040 Hb_000948_220 Hb_000948_220 Hb_002081_030--Hb_000948_220 Hb_027472_160 Hb_027472_160 Hb_002081_030--Hb_027472_160 Hb_003929_150 Hb_003929_150 Hb_000465_510--Hb_003929_150 Hb_001322_070 Hb_001322_070 Hb_000465_510--Hb_001322_070 Hb_000768_130 Hb_000768_130 Hb_000465_510--Hb_000768_130 Hb_002060_010 Hb_002060_010 Hb_000465_510--Hb_002060_010 Hb_000327_380 Hb_000327_380 Hb_000465_510--Hb_000327_380 Hb_010560_030 Hb_010560_030 Hb_000465_510--Hb_010560_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.431572 0.876197 1.49693 1.67221 0 0.183678
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.09226 4.67218 1.7414 0.735762 0.317872

CAGE analysis