Hb_098533_020

Information

Type -
Description -
Location Contig98533: 8118-9414
Sequence    

Annotation

kegg
ID tcc:TCM_016812
description Zinc finger family protein
nr
ID XP_012082264.1
description PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
swissprot
ID Q67YE6
description Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2
trembl
ID A0A067LAI2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09661 PE=4 SV=1
Gene Ontology
ID GO:0005622
description zinc finger an1 domain-containing stress-associated protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64650: 7886-9113
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_098533_020 0.0 - - PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
2 Hb_000031_080 0.1286178524 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
3 Hb_000189_540 0.1551629571 - - PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Jatropha curcas]
4 Hb_000465_510 0.1659048678 - - PREDICTED: GTP-binding protein YPTM2 [Populus euphratica]
5 Hb_000152_100 0.1664423832 - - PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Jatropha curcas]
6 Hb_000340_500 0.1802002165 - - PREDICTED: aldo-keto reductase-like [Jatropha curcas]
7 Hb_005015_030 0.1827201922 - - PREDICTED: uncharacterized protein LOC105636546 [Jatropha curcas]
8 Hb_000394_110 0.1830778031 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
9 Hb_000809_060 0.1863094278 transcription factor TF Family: LOB LOB domain-containing 36 -like protein [Gossypium arboreum]
10 Hb_002081_030 0.1866187871 - - unnamed protein product [Coffea canephora]
11 Hb_002260_010 0.1866791319 - - PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Sesamum indicum]
12 Hb_004787_040 0.1878661788 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000329_550 0.1887476177 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 8 [Jatropha curcas]
14 Hb_004679_060 0.1896363671 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002686_180 0.1901916225 - - PREDICTED: early nodulin-93-like [Populus euphratica]
16 Hb_009778_040 0.1938788697 - - PREDICTED: uncharacterized protein LOC105110611 [Populus euphratica]
17 Hb_020805_060 0.1955731349 - - PREDICTED: protein S-acyltransferase 21 [Jatropha curcas]
18 Hb_001105_090 0.1970959393 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
19 Hb_024074_010 0.1984547822 - - PREDICTED: cytochrome c [Jatropha curcas]
20 Hb_001771_080 0.1995029834 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Amborella trichopoda]

Gene co-expression network

sample Hb_098533_020 Hb_098533_020 Hb_000031_080 Hb_000031_080 Hb_098533_020--Hb_000031_080 Hb_000189_540 Hb_000189_540 Hb_098533_020--Hb_000189_540 Hb_000465_510 Hb_000465_510 Hb_098533_020--Hb_000465_510 Hb_000152_100 Hb_000152_100 Hb_098533_020--Hb_000152_100 Hb_000340_500 Hb_000340_500 Hb_098533_020--Hb_000340_500 Hb_005015_030 Hb_005015_030 Hb_098533_020--Hb_005015_030 Hb_009778_040 Hb_009778_040 Hb_000031_080--Hb_009778_040 Hb_002243_060 Hb_002243_060 Hb_000031_080--Hb_002243_060 Hb_000809_060 Hb_000809_060 Hb_000031_080--Hb_000809_060 Hb_002081_030 Hb_002081_030 Hb_000031_080--Hb_002081_030 Hb_000031_080--Hb_000465_510 Hb_001322_070 Hb_001322_070 Hb_000189_540--Hb_001322_070 Hb_002686_180 Hb_002686_180 Hb_000189_540--Hb_002686_180 Hb_098315_020 Hb_098315_020 Hb_000189_540--Hb_098315_020 Hb_020805_060 Hb_020805_060 Hb_000189_540--Hb_020805_060 Hb_000155_090 Hb_000155_090 Hb_000189_540--Hb_000155_090 Hb_000152_210 Hb_000152_210 Hb_000189_540--Hb_000152_210 Hb_003929_150 Hb_003929_150 Hb_000465_510--Hb_003929_150 Hb_000465_510--Hb_001322_070 Hb_000768_130 Hb_000768_130 Hb_000465_510--Hb_000768_130 Hb_002060_010 Hb_002060_010 Hb_000465_510--Hb_002060_010 Hb_000327_380 Hb_000327_380 Hb_000465_510--Hb_000327_380 Hb_010560_030 Hb_010560_030 Hb_000465_510--Hb_010560_030 Hb_007218_100 Hb_007218_100 Hb_000152_100--Hb_007218_100 Hb_000152_100--Hb_005015_030 Hb_000152_100--Hb_000031_080 Hb_000152_100--Hb_009778_040 Hb_004567_020 Hb_004567_020 Hb_000152_100--Hb_004567_020 Hb_000340_500--Hb_002081_030 Hb_000340_500--Hb_000809_060 Hb_000258_250 Hb_000258_250 Hb_000340_500--Hb_000258_250 Hb_000340_500--Hb_002686_180 Hb_024074_010 Hb_024074_010 Hb_000340_500--Hb_024074_010 Hb_001726_040 Hb_001726_040 Hb_000340_500--Hb_001726_040 Hb_002811_080 Hb_002811_080 Hb_005015_030--Hb_002811_080 Hb_006478_160 Hb_006478_160 Hb_005015_030--Hb_006478_160 Hb_000975_320 Hb_000975_320 Hb_005015_030--Hb_000975_320 Hb_000731_190 Hb_000731_190 Hb_005015_030--Hb_000731_190 Hb_002260_010 Hb_002260_010 Hb_005015_030--Hb_002260_010 Hb_001172_120 Hb_001172_120 Hb_005015_030--Hb_001172_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.68624 36.8368 52.9411 38.3113 5.07519 3.55352
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.2807 134.055 45.068 11.1135 6.29204

CAGE analysis