Hb_001828_030

Information

Type -
Description -
Location Contig1828: 30235-31995
Sequence    

Annotation

kegg
ID cmo:103486121
description glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform
nr
ID AIE47268.1
description glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
swissprot
ID P37830
description Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Solanum tuberosum GN=G6PDH PE=2 SV=1
trembl
ID A0A068LJY6
description Glucose-6-phosphate 1-dehydrogenase OS=Hevea brasiliensis GN=G6PDH-3 PE=2 SV=1
Gene Ontology
ID GO:0016491
description glucose-6-phosphate 1- cytoplasmic isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001828_030 0.0 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
2 Hb_001355_130 0.2448473819 - - PREDICTED: uncharacterized protein LOC105137896 [Populus euphratica]
3 Hb_002043_110 0.2488884505 - - hypothetical protein POPTR_0001s19500g [Populus trichocarpa]
4 Hb_000504_110 0.2835017328 - - F-box/LRR-repeat protein, putative [Ricinus communis]
5 Hb_000005_400 0.2846725063 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X2 [Jatropha curcas]
6 Hb_007432_020 0.2882896354 - - hypothetical protein POPTR_0010s13310g [Populus trichocarpa]
7 Hb_000166_060 0.29778503 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007553_010 0.2998505331 - - -
9 Hb_005873_010 0.3022786029 - - cysteine desulfurylase, putative [Ricinus communis]
10 Hb_000890_090 0.3079320472 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
11 Hb_030982_060 0.3092819429 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002918_230 0.3171222516 - - PREDICTED: probable glutathione S-transferase [Gossypium raimondii]
13 Hb_000172_190 0.3177465362 - - PREDICTED: uncharacterized protein LOC105650824 [Jatropha curcas]
14 Hb_003947_040 0.3179728252 - - Leucine-rich repeat transmembrane protein kinase protein, putative [Theobroma cacao]
15 Hb_007317_080 0.3209534211 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
16 Hb_000345_250 0.3221169361 - - cullin 1-like protein [Hevea brasiliensis]
17 Hb_000031_260 0.3242391484 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
18 Hb_002989_060 0.3257160964 - - hypothetical protein JCGZ_22461 [Jatropha curcas]
19 Hb_004724_450 0.3266332604 - - PREDICTED: uncharacterized protein LOC105647069 isoform X1 [Jatropha curcas]
20 Hb_000692_010 0.3270869507 - - PREDICTED: uncharacterized protein LOC105635295 [Jatropha curcas]

Gene co-expression network

sample Hb_001828_030 Hb_001828_030 Hb_001355_130 Hb_001355_130 Hb_001828_030--Hb_001355_130 Hb_002043_110 Hb_002043_110 Hb_001828_030--Hb_002043_110 Hb_000504_110 Hb_000504_110 Hb_001828_030--Hb_000504_110 Hb_000005_400 Hb_000005_400 Hb_001828_030--Hb_000005_400 Hb_007432_020 Hb_007432_020 Hb_001828_030--Hb_007432_020 Hb_000166_060 Hb_000166_060 Hb_001828_030--Hb_000166_060 Hb_094437_060 Hb_094437_060 Hb_001355_130--Hb_094437_060 Hb_002918_230 Hb_002918_230 Hb_001355_130--Hb_002918_230 Hb_183623_010 Hb_183623_010 Hb_001355_130--Hb_183623_010 Hb_005873_010 Hb_005873_010 Hb_001355_130--Hb_005873_010 Hb_000879_190 Hb_000879_190 Hb_001355_130--Hb_000879_190 Hb_004976_050 Hb_004976_050 Hb_001355_130--Hb_004976_050 Hb_002043_110--Hb_000504_110 Hb_007317_080 Hb_007317_080 Hb_002043_110--Hb_007317_080 Hb_026747_020 Hb_026747_020 Hb_002043_110--Hb_026747_020 Hb_001022_040 Hb_001022_040 Hb_002043_110--Hb_001022_040 Hb_021888_120 Hb_021888_120 Hb_002043_110--Hb_021888_120 Hb_001675_030 Hb_001675_030 Hb_000504_110--Hb_001675_030 Hb_003687_030 Hb_003687_030 Hb_000504_110--Hb_003687_030 Hb_000307_120 Hb_000307_120 Hb_000504_110--Hb_000307_120 Hb_005363_010 Hb_005363_010 Hb_000504_110--Hb_005363_010 Hb_004724_450 Hb_004724_450 Hb_000504_110--Hb_004724_450 Hb_007553_010 Hb_007553_010 Hb_000005_400--Hb_007553_010 Hb_000042_360 Hb_000042_360 Hb_000005_400--Hb_000042_360 Hb_162275_020 Hb_162275_020 Hb_000005_400--Hb_162275_020 Hb_000270_740 Hb_000270_740 Hb_000005_400--Hb_000270_740 Hb_158104_020 Hb_158104_020 Hb_000005_400--Hb_158104_020 Hb_003502_100 Hb_003502_100 Hb_000005_400--Hb_003502_100 Hb_004931_100 Hb_004931_100 Hb_007432_020--Hb_004931_100 Hb_004128_110 Hb_004128_110 Hb_007432_020--Hb_004128_110 Hb_000317_400 Hb_000317_400 Hb_007432_020--Hb_000317_400 Hb_000692_010 Hb_000692_010 Hb_007432_020--Hb_000692_010 Hb_105602_010 Hb_105602_010 Hb_007432_020--Hb_105602_010 Hb_002217_230 Hb_002217_230 Hb_007432_020--Hb_002217_230 Hb_003777_170 Hb_003777_170 Hb_000166_060--Hb_003777_170 Hb_006018_060 Hb_006018_060 Hb_000166_060--Hb_006018_060 Hb_185224_010 Hb_185224_010 Hb_000166_060--Hb_185224_010 Hb_001504_140 Hb_001504_140 Hb_000166_060--Hb_001504_140 Hb_000042_220 Hb_000042_220 Hb_000166_060--Hb_000042_220 Hb_011472_010 Hb_011472_010 Hb_000166_060--Hb_011472_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.131844 0.0693305 0.655217 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.05692 0.498358 0.144599 1.22856 0

CAGE analysis