Hb_105602_010

Information

Type -
Description -
Location Contig105602: 403-3943
Sequence    

Annotation

kegg
ID mtr:MTR_6g069660
description D-tagatose-1,6-bisphosphate aldolase subunit gatY
nr
ID XP_007036855.1
description Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
swissprot
ID Q703I2
description Fructose-bisphosphate aldolase OS=Thermus caldophilus GN=fba PE=1 SV=1
trembl
ID A0A061FVT7
description Ketose-bisphosphate aldolase class-II family protein isoform 5 OS=Theobroma cacao GN=TCM_012876 PE=4 SV=1
Gene Ontology
ID GO:0008270
description ketose-bisphosphate aldolase class-ii family protein isoform 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105602_010 0.0 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
2 Hb_009687_010 0.0997602878 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X4 [Jatropha curcas]
3 Hb_004064_010 0.1009359678 - - PREDICTED: uncharacterized protein LOC105133340 isoform X1 [Populus euphratica]
4 Hb_000621_020 0.1033374865 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
5 Hb_003266_100 0.1173917535 - - Isomerase protein [Gossypium arboreum]
6 Hb_001332_040 0.1205057961 - - PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca]
7 Hb_000103_270 0.1294123646 - - PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Fragaria vesca subsp. vesca]
8 Hb_002027_140 0.1309136392 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
9 Hb_109002_020 0.1365636391 - - PREDICTED: CTP synthase-like [Jatropha curcas]
10 Hb_004079_080 0.1376391346 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
11 Hb_006698_030 0.1441817649 - - PREDICTED: uncharacterized protein LOC105633969 [Jatropha curcas]
12 Hb_002835_100 0.1467226708 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 6-like [Jatropha curcas]
13 Hb_016522_010 0.1479820927 - - PREDICTED: short-chain dehydrogenase/reductase 2b-like [Jatropha curcas]
14 Hb_001486_030 0.148281118 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005285_030 0.1505962295 - - hypothetical protein JCGZ_20905 [Jatropha curcas]
16 Hb_014894_010 0.1510337725 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
17 Hb_000015_030 0.1514646896 - - PREDICTED: THO complex subunit 4B-like [Jatropha curcas]
18 Hb_003098_020 0.1518215509 - - 40S ribosomal protein S5B [Hevea brasiliensis]
19 Hb_000297_020 0.1539927905 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
20 Hb_002849_200 0.1556770786 - - hypothetical protein JCGZ_15712 [Jatropha curcas]

Gene co-expression network

sample Hb_105602_010 Hb_105602_010 Hb_009687_010 Hb_009687_010 Hb_105602_010--Hb_009687_010 Hb_004064_010 Hb_004064_010 Hb_105602_010--Hb_004064_010 Hb_000621_020 Hb_000621_020 Hb_105602_010--Hb_000621_020 Hb_003266_100 Hb_003266_100 Hb_105602_010--Hb_003266_100 Hb_001332_040 Hb_001332_040 Hb_105602_010--Hb_001332_040 Hb_000103_270 Hb_000103_270 Hb_105602_010--Hb_000103_270 Hb_009687_010--Hb_000103_270 Hb_005914_010 Hb_005914_010 Hb_009687_010--Hb_005914_010 Hb_002027_140 Hb_002027_140 Hb_009687_010--Hb_002027_140 Hb_006698_030 Hb_006698_030 Hb_009687_010--Hb_006698_030 Hb_000329_760 Hb_000329_760 Hb_009687_010--Hb_000329_760 Hb_004064_010--Hb_003266_100 Hb_004064_010--Hb_000621_020 Hb_109002_020 Hb_109002_020 Hb_004064_010--Hb_109002_020 Hb_001341_100 Hb_001341_100 Hb_004064_010--Hb_001341_100 Hb_001486_030 Hb_001486_030 Hb_004064_010--Hb_001486_030 Hb_000621_020--Hb_003266_100 Hb_000621_020--Hb_109002_020 Hb_004079_080 Hb_004079_080 Hb_000621_020--Hb_004079_080 Hb_000621_020--Hb_000103_270 Hb_016522_010 Hb_016522_010 Hb_003266_100--Hb_016522_010 Hb_000483_260 Hb_000483_260 Hb_003266_100--Hb_000483_260 Hb_003266_100--Hb_109002_020 Hb_000665_050 Hb_000665_050 Hb_003266_100--Hb_000665_050 Hb_000286_060 Hb_000286_060 Hb_001332_040--Hb_000286_060 Hb_001332_040--Hb_003266_100 Hb_001332_040--Hb_016522_010 Hb_001332_040--Hb_000103_270 Hb_001332_040--Hb_000621_020 Hb_004429_090 Hb_004429_090 Hb_001332_040--Hb_004429_090 Hb_000210_120 Hb_000210_120 Hb_000103_270--Hb_000210_120 Hb_000096_160 Hb_000096_160 Hb_000103_270--Hb_000096_160 Hb_005914_170 Hb_005914_170 Hb_000103_270--Hb_005914_170 Hb_000103_270--Hb_006698_030 Hb_003098_020 Hb_003098_020 Hb_000103_270--Hb_003098_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.51154 3.4404 2.67293 4.02363 2.61296 2.22201
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.09132 10.253 6.68482 15.6709 2.35919

CAGE analysis