Hb_094437_060

Information

Type -
Description -
Location Contig94437: 13991-19824
Sequence    

Annotation

kegg
ID tcc:TCM_034739
description Cytochrome B5, n3,ATCB5-D,CB5-D
nr
ID XP_012068253.1
description PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
swissprot
ID Q9ZWT2
description Cytochrome B5 isoform D OS=Arabidopsis thaliana GN=CYTB5-D PE=1 SV=1
trembl
ID A0A067KZN8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16054 PE=3 SV=1
Gene Ontology
ID GO:0004128
description cytochrome b5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63234: 14141-14907 , PASA_asmbl_63235: 16815-19803 , PASA_asmbl_63236: 17861-18347
cDNA
(Sanger)
(ID:Location)		 002_C19.ab1: 16815-19551 , 006_B10.ab1: 14171-14907 , 022_E12.ab1: 16928-19555 , 022_H16.ab1: 14171-14907 , 027_D04.ab1: 14171-14907 , 030_L18.ab1: 14171-14907 , 049_O17.ab1: 14177-14903

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094437_060 0.0 - - PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
2 Hb_000805_320 0.1420891572 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
3 Hb_138710_010 0.1652829665 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
4 Hb_001355_130 0.1720304405 - - PREDICTED: uncharacterized protein LOC105137896 [Populus euphratica]
5 Hb_005873_010 0.1811183521 - - cysteine desulfurylase, putative [Ricinus communis]
6 Hb_007432_020 0.185575022 - - hypothetical protein POPTR_0010s13310g [Populus trichocarpa]
7 Hb_105602_010 0.1895992544 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
8 Hb_000184_230 0.1922678651 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Jatropha curcas]
9 Hb_080147_100 0.1947479408 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN [Jatropha curcas]
10 Hb_001258_060 0.1963313298 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
11 Hb_004976_050 0.2042373238 - - -
12 Hb_001332_040 0.2053100702 - - PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca]
13 Hb_000120_390 0.2116408633 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
14 Hb_002798_010 0.2150471076 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
15 Hb_000011_290 0.2156804725 - - PREDICTED: alanine aminotransferase 2-like [Jatropha curcas]
16 Hb_183623_010 0.2158172055 - - aldo-keto reductase, putative [Ricinus communis]
17 Hb_001699_200 0.2195399008 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic [Jatropha curcas]
18 Hb_014894_010 0.2230300868 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
19 Hb_000005_250 0.2234050182 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003073_180 0.2246743452 - - hypothetical protein JCGZ_20198 [Jatropha curcas]

Gene co-expression network

sample Hb_094437_060 Hb_094437_060 Hb_000805_320 Hb_000805_320 Hb_094437_060--Hb_000805_320 Hb_138710_010 Hb_138710_010 Hb_094437_060--Hb_138710_010 Hb_001355_130 Hb_001355_130 Hb_094437_060--Hb_001355_130 Hb_005873_010 Hb_005873_010 Hb_094437_060--Hb_005873_010 Hb_007432_020 Hb_007432_020 Hb_094437_060--Hb_007432_020 Hb_105602_010 Hb_105602_010 Hb_094437_060--Hb_105602_010 Hb_004242_190 Hb_004242_190 Hb_000805_320--Hb_004242_190 Hb_000805_320--Hb_105602_010 Hb_001258_060 Hb_001258_060 Hb_000805_320--Hb_001258_060 Hb_003073_180 Hb_003073_180 Hb_000805_320--Hb_003073_180 Hb_014894_010 Hb_014894_010 Hb_000805_320--Hb_014894_010 Hb_001390_030 Hb_001390_030 Hb_138710_010--Hb_001390_030 Hb_004079_080 Hb_004079_080 Hb_138710_010--Hb_004079_080 Hb_001332_040 Hb_001332_040 Hb_138710_010--Hb_001332_040 Hb_138710_010--Hb_000805_320 Hb_003226_120 Hb_003226_120 Hb_138710_010--Hb_003226_120 Hb_002918_230 Hb_002918_230 Hb_001355_130--Hb_002918_230 Hb_183623_010 Hb_183623_010 Hb_001355_130--Hb_183623_010 Hb_001355_130--Hb_005873_010 Hb_000879_190 Hb_000879_190 Hb_001355_130--Hb_000879_190 Hb_004976_050 Hb_004976_050 Hb_001355_130--Hb_004976_050 Hb_005873_010--Hb_001332_040 Hb_001699_200 Hb_001699_200 Hb_005873_010--Hb_001699_200 Hb_005873_010--Hb_105602_010 Hb_000614_170 Hb_000614_170 Hb_005873_010--Hb_000614_170 Hb_000621_020 Hb_000621_020 Hb_005873_010--Hb_000621_020 Hb_001623_160 Hb_001623_160 Hb_005873_010--Hb_001623_160 Hb_004931_100 Hb_004931_100 Hb_007432_020--Hb_004931_100 Hb_004128_110 Hb_004128_110 Hb_007432_020--Hb_004128_110 Hb_000317_400 Hb_000317_400 Hb_007432_020--Hb_000317_400 Hb_000692_010 Hb_000692_010 Hb_007432_020--Hb_000692_010 Hb_007432_020--Hb_105602_010 Hb_002217_230 Hb_002217_230 Hb_007432_020--Hb_002217_230 Hb_009687_010 Hb_009687_010 Hb_105602_010--Hb_009687_010 Hb_004064_010 Hb_004064_010 Hb_105602_010--Hb_004064_010 Hb_105602_010--Hb_000621_020 Hb_003266_100 Hb_003266_100 Hb_105602_010--Hb_003266_100 Hb_105602_010--Hb_001332_040 Hb_000103_270 Hb_000103_270 Hb_105602_010--Hb_000103_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
71.2078 55.1422 91.5277 74.4859 43.1073 38.1535
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
266.021 248.828 145.754 783.096 19.7875

CAGE analysis