Hb_001390_030

Information

Type -
Description -
Location Contig1390: 47824-53556
Sequence    

Annotation

kegg
ID rcu:RCOM_1381360
description Receptor protein kinase CLAVATA1 precursor, putative (EC:2.7.11.30 1.3.1.74)
nr
ID XP_012074538.1
description PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
swissprot
ID Q9LJM4
description Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1
trembl
ID A0A067KUF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09887 PE=4 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase haiku2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10688: 49717-49912
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001390_030 0.0 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
2 Hb_138710_010 0.1519873211 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
3 Hb_011633_040 0.1851501903 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Jatropha curcas]
4 Hb_003813_120 0.1859735993 - - zinc finger protein, putative [Ricinus communis]
5 Hb_012545_090 0.1960277494 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
6 Hb_029921_030 0.1988196418 - - conserved hypothetical protein [Ricinus communis]
7 Hb_127886_010 0.2047128434 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
8 Hb_006717_070 0.2130000952 transcription factor TF Family: MYB-related PREDICTED: transcription factor CPC-like [Jatropha curcas]
9 Hb_001439_110 0.2134936489 transcription factor TF Family: ERF PREDICTED: uncharacterized protein LOC105133481 [Populus euphratica]
10 Hb_003226_120 0.2150405341 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000244_280 0.2201974684 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X1 [Jatropha curcas]
12 Hb_004976_050 0.2203258418 - - -
13 Hb_003972_060 0.2212796477 - - PREDICTED: UDP-arabinopyranose mutase 3 [Populus euphratica]
14 Hb_002539_010 0.2214096631 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
15 Hb_002835_350 0.223527514 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
16 Hb_003845_020 0.2255827178 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000227_040 0.2260971642 - - Stem-specific protein TSJT1, putative [Ricinus communis]
18 Hb_004129_050 0.2276970132 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
19 Hb_012760_040 0.2291666345 - - PREDICTED: aconitate hydratase 1 [Jatropha curcas]
20 Hb_007943_160 0.229361867 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]

Gene co-expression network

sample Hb_001390_030 Hb_001390_030 Hb_138710_010 Hb_138710_010 Hb_001390_030--Hb_138710_010 Hb_011633_040 Hb_011633_040 Hb_001390_030--Hb_011633_040 Hb_003813_120 Hb_003813_120 Hb_001390_030--Hb_003813_120 Hb_012545_090 Hb_012545_090 Hb_001390_030--Hb_012545_090 Hb_029921_030 Hb_029921_030 Hb_001390_030--Hb_029921_030 Hb_127886_010 Hb_127886_010 Hb_001390_030--Hb_127886_010 Hb_094437_060 Hb_094437_060 Hb_138710_010--Hb_094437_060 Hb_004079_080 Hb_004079_080 Hb_138710_010--Hb_004079_080 Hb_001332_040 Hb_001332_040 Hb_138710_010--Hb_001332_040 Hb_000805_320 Hb_000805_320 Hb_138710_010--Hb_000805_320 Hb_003226_120 Hb_003226_120 Hb_138710_010--Hb_003226_120 Hb_002539_010 Hb_002539_010 Hb_011633_040--Hb_002539_010 Hb_011633_040--Hb_029921_030 Hb_027380_190 Hb_027380_190 Hb_011633_040--Hb_027380_190 Hb_152868_030 Hb_152868_030 Hb_011633_040--Hb_152868_030 Hb_011633_040--Hb_012545_090 Hb_001140_360 Hb_001140_360 Hb_011633_040--Hb_001140_360 Hb_000347_110 Hb_000347_110 Hb_003813_120--Hb_000347_110 Hb_003626_040 Hb_003626_040 Hb_003813_120--Hb_003626_040 Hb_006717_070 Hb_006717_070 Hb_003813_120--Hb_006717_070 Hb_000227_040 Hb_000227_040 Hb_003813_120--Hb_000227_040 Hb_000702_060 Hb_000702_060 Hb_003813_120--Hb_000702_060 Hb_001500_070 Hb_001500_070 Hb_003813_120--Hb_001500_070 Hb_012545_090--Hb_000227_040 Hb_008226_070 Hb_008226_070 Hb_012545_090--Hb_008226_070 Hb_012760_040 Hb_012760_040 Hb_012545_090--Hb_012760_040 Hb_004129_050 Hb_004129_050 Hb_012545_090--Hb_004129_050 Hb_012545_090--Hb_000702_060 Hb_009732_020 Hb_009732_020 Hb_012545_090--Hb_009732_020 Hb_002471_260 Hb_002471_260 Hb_029921_030--Hb_002471_260 Hb_003972_060 Hb_003972_060 Hb_029921_030--Hb_003972_060 Hb_001776_190 Hb_001776_190 Hb_029921_030--Hb_001776_190 Hb_000421_270 Hb_000421_270 Hb_029921_030--Hb_000421_270 Hb_006538_190 Hb_006538_190 Hb_029921_030--Hb_006538_190 Hb_127886_010--Hb_006717_070 Hb_000645_210 Hb_000645_210 Hb_127886_010--Hb_000645_210 Hb_127886_010--Hb_000227_040 Hb_000395_220 Hb_000395_220 Hb_127886_010--Hb_000395_220 Hb_001780_150 Hb_001780_150 Hb_127886_010--Hb_001780_150 Hb_011287_010 Hb_011287_010 Hb_127886_010--Hb_011287_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.84786 1.58444 1.65594 2.7111 0.338476 0.395777
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.40565 2.15279 0.943705 9.53662 0.561607

CAGE analysis