Hb_029921_030

Information

Type -
Description -
Location Contig29921: 14144-15178
Sequence    

Annotation

kegg
ID rcu:RCOM_1680620
description hypothetical protein
nr
ID XP_002509612.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RBS8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1680620 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029921_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_011633_040 0.1293532098 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Jatropha curcas]
3 Hb_002471_260 0.1783731769 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas]
4 Hb_003972_060 0.1873801857 - - PREDICTED: UDP-arabinopyranose mutase 3 [Populus euphratica]
5 Hb_001776_190 0.1873909122 - - PREDICTED: protein kinase 2A, chloroplastic-like [Jatropha curcas]
6 Hb_000421_270 0.1927691614 transcription factor TF Family: LOB LOB domain-containing protein 1 [Theobroma cacao]
7 Hb_006538_190 0.1987887413 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
8 Hb_001390_030 0.1988196418 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
9 Hb_027380_190 0.2000667536 - - PREDICTED: uncharacterized protein LOC105634028 isoform X1 [Jatropha curcas]
10 Hb_002025_350 0.2001717894 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
11 Hb_004495_020 0.200996044 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
12 Hb_002539_010 0.2016338525 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
13 Hb_001170_010 0.2034032621 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
14 Hb_000853_060 0.205185914 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
15 Hb_002835_350 0.2090469059 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
16 Hb_158092_060 0.2096849866 - - aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
17 Hb_007153_040 0.2110206345 - - PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
18 Hb_001140_360 0.2131963805 - - -
19 Hb_012545_090 0.2144648657 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
20 Hb_000116_590 0.2192150729 - - PREDICTED: splicing factor, suppressor of white-apricot homolog [Malus domestica]

Gene co-expression network

sample Hb_029921_030 Hb_029921_030 Hb_011633_040 Hb_011633_040 Hb_029921_030--Hb_011633_040 Hb_002471_260 Hb_002471_260 Hb_029921_030--Hb_002471_260 Hb_003972_060 Hb_003972_060 Hb_029921_030--Hb_003972_060 Hb_001776_190 Hb_001776_190 Hb_029921_030--Hb_001776_190 Hb_000421_270 Hb_000421_270 Hb_029921_030--Hb_000421_270 Hb_006538_190 Hb_006538_190 Hb_029921_030--Hb_006538_190 Hb_002539_010 Hb_002539_010 Hb_011633_040--Hb_002539_010 Hb_027380_190 Hb_027380_190 Hb_011633_040--Hb_027380_190 Hb_152868_030 Hb_152868_030 Hb_011633_040--Hb_152868_030 Hb_012545_090 Hb_012545_090 Hb_011633_040--Hb_012545_090 Hb_001140_360 Hb_001140_360 Hb_011633_040--Hb_001140_360 Hb_028872_150 Hb_028872_150 Hb_002471_260--Hb_028872_150 Hb_002471_260--Hb_003972_060 Hb_002471_260--Hb_002539_010 Hb_002471_260--Hb_011633_040 Hb_021409_140 Hb_021409_140 Hb_002471_260--Hb_021409_140 Hb_164926_040 Hb_164926_040 Hb_003972_060--Hb_164926_040 Hb_000139_140 Hb_000139_140 Hb_003972_060--Hb_000139_140 Hb_000165_200 Hb_000165_200 Hb_003972_060--Hb_000165_200 Hb_004330_080 Hb_004330_080 Hb_003972_060--Hb_004330_080 Hb_000220_110 Hb_000220_110 Hb_003972_060--Hb_000220_110 Hb_002518_090 Hb_002518_090 Hb_003972_060--Hb_002518_090 Hb_002284_190 Hb_002284_190 Hb_001776_190--Hb_002284_190 Hb_008759_020 Hb_008759_020 Hb_001776_190--Hb_008759_020 Hb_029904_010 Hb_029904_010 Hb_001776_190--Hb_029904_010 Hb_000116_590 Hb_000116_590 Hb_001776_190--Hb_000116_590 Hb_001776_190--Hb_011633_040 Hb_002025_350 Hb_002025_350 Hb_000421_270--Hb_002025_350 Hb_032631_050 Hb_032631_050 Hb_000421_270--Hb_032631_050 Hb_000421_270--Hb_000116_590 Hb_011200_020 Hb_011200_020 Hb_000421_270--Hb_011200_020 Hb_029584_090 Hb_029584_090 Hb_000421_270--Hb_029584_090 Hb_000963_200 Hb_000963_200 Hb_000421_270--Hb_000963_200 Hb_017170_030 Hb_017170_030 Hb_006538_190--Hb_017170_030 Hb_000614_170 Hb_000614_170 Hb_006538_190--Hb_000614_170 Hb_162275_020 Hb_162275_020 Hb_006538_190--Hb_162275_020 Hb_001699_200 Hb_001699_200 Hb_006538_190--Hb_001699_200 Hb_007153_040 Hb_007153_040 Hb_006538_190--Hb_007153_040 Hb_000317_420 Hb_000317_420 Hb_006538_190--Hb_000317_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0708137 0.41438 0.437038 0.838805 0 0.0416178
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.108227 0.510693 0.390266 1.78226 0.173447

CAGE analysis