Hb_152868_030

Information

Type -
Description -
Location Contig152868: 84306-87238
Sequence    

Annotation

kegg
ID rcu:RCOM_0038750
description abhydrolase domain containing, putative
nr
ID XP_002532883.1
description abhydrolase domain containing, putative [Ricinus communis]
swissprot
ID Q8R2Y0
description Monoacylglycerol lipase ABHD6 OS=Mus musculus GN=Abhd6 PE=1 SV=1
trembl
ID B9T3R4
description Abhydrolase domain containing, putative OS=Ricinus communis GN=RCOM_0038750 PE=4 SV=1
Gene Ontology
ID GO:0003824
description abhydrolase domain

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13126: 84339-87164
cDNA
(Sanger)
(ID:Location)		 040_C16.ab1: 86551-87164

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152868_030 0.0 - - abhydrolase domain containing, putative [Ricinus communis]
2 Hb_027380_190 0.1290779258 - - PREDICTED: uncharacterized protein LOC105634028 isoform X1 [Jatropha curcas]
3 Hb_005015_110 0.1366345336 - - PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Jatropha curcas]
4 Hb_002170_020 0.1514294801 transcription factor TF Family: MYB MYB transcription factor [Hevea brasiliensis]
5 Hb_003025_030 0.1525417912 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Jatropha curcas]
6 Hb_000465_150 0.1569421014 - - PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Jatropha curcas]
7 Hb_011633_040 0.159890709 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Jatropha curcas]
8 Hb_007229_050 0.1607414719 - - PREDICTED: palmitoyl-protein thioesterase 1 isoform X1 [Jatropha curcas]
9 Hb_000227_330 0.1611200356 - - Acyl-CoA synthetase [Ricinus communis]
10 Hb_000005_340 0.1625643716 - - PREDICTED: uncharacterized protein LOC105634028 isoform X1 [Jatropha curcas]
11 Hb_006700_040 0.1644210523 - - PREDICTED: vacuolar-sorting receptor 6-like [Jatropha curcas]
12 Hb_101449_010 0.1660019017 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
13 Hb_002232_160 0.1670647279 - - Transaminase mtnE, putative [Ricinus communis]
14 Hb_001159_020 0.1672222564 - - -
15 Hb_000804_020 0.1672901841 - - PREDICTED: aconitate hydratase, cytoplasmic [Jatropha curcas]
16 Hb_001564_070 0.1677099635 - - PREDICTED: G patch domain-containing protein TGH [Jatropha curcas]
17 Hb_004657_060 0.1678650893 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
18 Hb_001040_150 0.1697319827 - - conserved hypothetical protein [Ricinus communis]
19 Hb_011853_010 0.170614399 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
20 Hb_177215_030 0.1706880605 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hevea brasiliensis]

Gene co-expression network

sample Hb_152868_030 Hb_152868_030 Hb_027380_190 Hb_027380_190 Hb_152868_030--Hb_027380_190 Hb_005015_110 Hb_005015_110 Hb_152868_030--Hb_005015_110 Hb_002170_020 Hb_002170_020 Hb_152868_030--Hb_002170_020 Hb_003025_030 Hb_003025_030 Hb_152868_030--Hb_003025_030 Hb_000465_150 Hb_000465_150 Hb_152868_030--Hb_000465_150 Hb_011633_040 Hb_011633_040 Hb_152868_030--Hb_011633_040 Hb_000172_280 Hb_000172_280 Hb_027380_190--Hb_000172_280 Hb_001817_100 Hb_001817_100 Hb_027380_190--Hb_001817_100 Hb_027380_190--Hb_000465_150 Hb_000907_150 Hb_000907_150 Hb_027380_190--Hb_000907_150 Hb_007590_090 Hb_007590_090 Hb_027380_190--Hb_007590_090 Hb_005015_110--Hb_000465_150 Hb_180378_010 Hb_180378_010 Hb_005015_110--Hb_180378_010 Hb_001571_060 Hb_001571_060 Hb_005015_110--Hb_001571_060 Hb_002486_080 Hb_002486_080 Hb_005015_110--Hb_002486_080 Hb_000139_340 Hb_000139_340 Hb_005015_110--Hb_000139_340 Hb_007416_110 Hb_007416_110 Hb_005015_110--Hb_007416_110 Hb_009535_030 Hb_009535_030 Hb_002170_020--Hb_009535_030 Hb_005016_010 Hb_005016_010 Hb_002170_020--Hb_005016_010 Hb_000683_050 Hb_000683_050 Hb_002170_020--Hb_000683_050 Hb_004030_060 Hb_004030_060 Hb_002170_020--Hb_004030_060 Hb_006683_020 Hb_006683_020 Hb_002170_020--Hb_006683_020 Hb_011872_020 Hb_011872_020 Hb_002170_020--Hb_011872_020 Hb_003025_030--Hb_000465_150 Hb_000804_020 Hb_000804_020 Hb_003025_030--Hb_000804_020 Hb_124315_010 Hb_124315_010 Hb_003025_030--Hb_124315_010 Hb_002281_020 Hb_002281_020 Hb_003025_030--Hb_002281_020 Hb_001564_070 Hb_001564_070 Hb_003025_030--Hb_001564_070 Hb_003025_030--Hb_007416_110 Hb_000465_150--Hb_007416_110 Hb_000465_150--Hb_002486_080 Hb_002232_430 Hb_002232_430 Hb_000465_150--Hb_002232_430 Hb_001493_150 Hb_001493_150 Hb_000465_150--Hb_001493_150 Hb_002539_010 Hb_002539_010 Hb_011633_040--Hb_002539_010 Hb_029921_030 Hb_029921_030 Hb_011633_040--Hb_029921_030 Hb_011633_040--Hb_027380_190 Hb_012545_090 Hb_012545_090 Hb_011633_040--Hb_012545_090 Hb_001140_360 Hb_001140_360 Hb_011633_040--Hb_001140_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.63353 9.90272 9.84985 9.57545 0.653402 0.608417
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.57285 5.83245 5.28908 21.4207 11.8869

CAGE analysis