Hb_017170_030

Information

Type -
Description -
Location Contig17170: 16026-21998
Sequence    

Annotation

kegg
ID mdm:103405633
description acyl-coenzyme A oxidase 3, peroxisomal-like
nr
ID XP_012079023.1
description PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
swissprot
ID P0CZ23
description Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=1
trembl
ID A0A067KHP0
description Acyl-coenzyme A oxidase OS=Jatropha curcas GN=JCGZ_12221 PE=3 SV=1
Gene Ontology
ID GO:0005777
description acyl-coenzyme a oxidase peroxisomal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16083: 16051-16710 , PASA_asmbl_16085: 17344-21596
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017170_030 0.0 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
2 Hb_006538_190 0.1003496446 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
3 Hb_000297_020 0.1350327929 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
4 Hb_162275_020 0.1529550749 - - phosphate transporter [Manihot esculenta]
5 Hb_000614_170 0.1554213859 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
6 Hb_000723_170 0.1608041509 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
7 Hb_007153_040 0.1704456601 - - PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
8 Hb_004079_080 0.1719513687 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
9 Hb_105602_010 0.1743622159 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
10 Hb_100147_010 0.1756685639 - - PREDICTED: exosome complex component MTR3 [Jatropha curcas]
11 Hb_000031_260 0.1766729193 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
12 Hb_002374_380 0.1806096855 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
13 Hb_017491_020 0.1838503809 - - hypothetical protein B456_011G056700 [Gossypium raimondii]
14 Hb_028487_170 0.1842302114 - - PREDICTED: uncharacterized protein LOC105634088 [Jatropha curcas]
15 Hb_029385_010 0.1851084743 - - CTP synthase family protein [Populus trichocarpa]
16 Hb_001623_160 0.1901171875 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
17 Hb_001332_040 0.1926471935 - - PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca]
18 Hb_001433_110 0.1930738156 - - PREDICTED: uncharacterized protein LOC105647469 isoform X1 [Jatropha curcas]
19 Hb_000621_020 0.1950896281 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
20 Hb_138710_010 0.19721985 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]

Gene co-expression network

sample Hb_017170_030 Hb_017170_030 Hb_006538_190 Hb_006538_190 Hb_017170_030--Hb_006538_190 Hb_000297_020 Hb_000297_020 Hb_017170_030--Hb_000297_020 Hb_162275_020 Hb_162275_020 Hb_017170_030--Hb_162275_020 Hb_000614_170 Hb_000614_170 Hb_017170_030--Hb_000614_170 Hb_000723_170 Hb_000723_170 Hb_017170_030--Hb_000723_170 Hb_007153_040 Hb_007153_040 Hb_017170_030--Hb_007153_040 Hb_006538_190--Hb_000614_170 Hb_006538_190--Hb_162275_020 Hb_001699_200 Hb_001699_200 Hb_006538_190--Hb_001699_200 Hb_006538_190--Hb_007153_040 Hb_000317_420 Hb_000317_420 Hb_006538_190--Hb_000317_420 Hb_000297_020--Hb_007153_040 Hb_105602_010 Hb_105602_010 Hb_000297_020--Hb_105602_010 Hb_004208_130 Hb_004208_130 Hb_000297_020--Hb_004208_130 Hb_000297_020--Hb_162275_020 Hb_000297_020--Hb_000614_170 Hb_162275_020--Hb_000614_170 Hb_000732_210 Hb_000732_210 Hb_162275_020--Hb_000732_210 Hb_000005_400 Hb_000005_400 Hb_162275_020--Hb_000005_400 Hb_000614_170--Hb_001699_200 Hb_001332_040 Hb_001332_040 Hb_000614_170--Hb_001332_040 Hb_002217_230 Hb_002217_230 Hb_000614_170--Hb_002217_230 Hb_028487_170 Hb_028487_170 Hb_000614_170--Hb_028487_170 Hb_029385_010 Hb_029385_010 Hb_000614_170--Hb_029385_010 Hb_001510_020 Hb_001510_020 Hb_000723_170--Hb_001510_020 Hb_003376_180 Hb_003376_180 Hb_000723_170--Hb_003376_180 Hb_000251_030 Hb_000251_030 Hb_000723_170--Hb_000251_030 Hb_003305_020 Hb_003305_020 Hb_000723_170--Hb_003305_020 Hb_000210_060 Hb_000210_060 Hb_000723_170--Hb_000210_060 Hb_000723_170--Hb_000317_420 Hb_004064_010 Hb_004064_010 Hb_007153_040--Hb_004064_010 Hb_007153_040--Hb_105602_010 Hb_000320_300 Hb_000320_300 Hb_007153_040--Hb_000320_300 Hb_003266_100 Hb_003266_100 Hb_007153_040--Hb_003266_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.973436 3.23902 2.0778 7.39668 0.280726 0.753046
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.91197 12.104 6.19887 16.0837 3.37073

CAGE analysis