Hb_000732_210

Information

Type -
Description -
Location Contig732: 204217-208410
Sequence    

Annotation

kegg
ID rcu:RCOM_1096030
description sugar transporter, putative (EC:1.3.1.74)
nr
ID CAN87006.1
description hexose transporter 1 [Hevea brasiliensis]
swissprot
ID Q41144
description Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1
trembl
ID B7FCC1
description Hexose transporter 1 OS=Hevea brasiliensis GN=hxt1 PE=2 SV=1
Gene Ontology
ID GO:0005634
description sugar carrier protein c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56128: 204616-205509
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_210 0.0 - - hexose transporter 1 [Hevea brasiliensis]
2 Hb_162275_020 0.1783497057 - - phosphate transporter [Manihot esculenta]
3 Hb_130719_010 0.189143159 - - V-type proton ATPase subunit E [Hevea brasiliensis]
4 Hb_000117_100 0.1899533846 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000614_170 0.1900257465 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
6 Hb_000297_020 0.1924558134 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
7 Hb_002217_230 0.1973968202 - - PREDICTED: uncharacterized protein LOC105643583 [Jatropha curcas]
8 Hb_005496_090 0.1975934861 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
9 Hb_138585_040 0.2001354077 - - PREDICTED: proteasome subunit alpha type-4 [Jatropha curcas]
10 Hb_083380_010 0.20100564 - - -
11 Hb_036790_020 0.2021794043 - - PREDICTED: polyadenylate-binding protein 3 [Jatropha curcas]
12 Hb_000059_010 0.2038276288 - - amino acid binding protein, putative [Ricinus communis]
13 Hb_011472_010 0.2058851373 - - PREDICTED: protein yippee-like [Jatropha curcas]
14 Hb_003913_080 0.2088298704 - - rpl27A [Hemiselmis andersenii]
15 Hb_008725_040 0.2091010778 - - PREDICTED: uncharacterized protein At4g29660 [Nelumbo nucifera]
16 Hb_116420_020 0.2105413479 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
17 Hb_012163_020 0.2106282377 - - PREDICTED: uncharacterized protein LOC105650815 isoform X3 [Jatropha curcas]
18 Hb_005054_260 0.2136085669 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A [Jatropha curcas]
19 Hb_001638_230 0.2155593842 - - RNA-binding region-containing protein, putative [Ricinus communis]
20 Hb_005278_040 0.2180235931 - - PREDICTED: sorcin-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000732_210 Hb_000732_210 Hb_162275_020 Hb_162275_020 Hb_000732_210--Hb_162275_020 Hb_130719_010 Hb_130719_010 Hb_000732_210--Hb_130719_010 Hb_000117_100 Hb_000117_100 Hb_000732_210--Hb_000117_100 Hb_000614_170 Hb_000614_170 Hb_000732_210--Hb_000614_170 Hb_000297_020 Hb_000297_020 Hb_000732_210--Hb_000297_020 Hb_002217_230 Hb_002217_230 Hb_000732_210--Hb_002217_230 Hb_017170_030 Hb_017170_030 Hb_162275_020--Hb_017170_030 Hb_162275_020--Hb_000297_020 Hb_006538_190 Hb_006538_190 Hb_162275_020--Hb_006538_190 Hb_162275_020--Hb_000614_170 Hb_000005_400 Hb_000005_400 Hb_162275_020--Hb_000005_400 Hb_005496_090 Hb_005496_090 Hb_130719_010--Hb_005496_090 Hb_000056_250 Hb_000056_250 Hb_130719_010--Hb_000056_250 Hb_003291_020 Hb_003291_020 Hb_130719_010--Hb_003291_020 Hb_001123_160 Hb_001123_160 Hb_130719_010--Hb_001123_160 Hb_000685_050 Hb_000685_050 Hb_130719_010--Hb_000685_050 Hb_005054_260 Hb_005054_260 Hb_130719_010--Hb_005054_260 Hb_003777_360 Hb_003777_360 Hb_000117_100--Hb_003777_360 Hb_007885_050 Hb_007885_050 Hb_000117_100--Hb_007885_050 Hb_009974_020 Hb_009974_020 Hb_000117_100--Hb_009974_020 Hb_000836_490 Hb_000836_490 Hb_000117_100--Hb_000836_490 Hb_004787_040 Hb_004787_040 Hb_000117_100--Hb_004787_040 Hb_001699_200 Hb_001699_200 Hb_000614_170--Hb_001699_200 Hb_001332_040 Hb_001332_040 Hb_000614_170--Hb_001332_040 Hb_000614_170--Hb_002217_230 Hb_000614_170--Hb_017170_030 Hb_028487_170 Hb_028487_170 Hb_000614_170--Hb_028487_170 Hb_029385_010 Hb_029385_010 Hb_000614_170--Hb_029385_010 Hb_000297_020--Hb_017170_030 Hb_007153_040 Hb_007153_040 Hb_000297_020--Hb_007153_040 Hb_105602_010 Hb_105602_010 Hb_000297_020--Hb_105602_010 Hb_004208_130 Hb_004208_130 Hb_000297_020--Hb_004208_130 Hb_000297_020--Hb_000614_170 Hb_032208_060 Hb_032208_060 Hb_002217_230--Hb_032208_060 Hb_004672_010 Hb_004672_010 Hb_002217_230--Hb_004672_010 Hb_001638_230 Hb_001638_230 Hb_002217_230--Hb_001638_230 Hb_000896_040 Hb_000896_040 Hb_002217_230--Hb_000896_040 Hb_004931_100 Hb_004931_100 Hb_002217_230--Hb_004931_100 Hb_005285_030 Hb_005285_030 Hb_002217_230--Hb_005285_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.81047 1.20681 2.5295 9.63541 0.523713 0.515522
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.23194 14.8254 15.6115 10.5569 0.729866

CAGE analysis