Hb_009974_020

Information

Type -
Description -
Location Contig9974: 6572-10927
Sequence    

Annotation

kegg
ID egr:104427753
description uncharacterized LOC104427753
nr
ID XP_010039097.1
description PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID S8C3P3
description Uncharacterized protein OS=Genlisea aurea GN=M569_13371 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009974_020 0.0 - - PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
2 Hb_003777_360 0.1873396156 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
3 Hb_000117_100 0.2162316825 - - conserved hypothetical protein [Ricinus communis]
4 Hb_140049_010 0.2216411678 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
5 Hb_001141_110 0.2245456983 - - hypothetical protein JCGZ_02206 [Jatropha curcas]
6 Hb_007558_020 0.2278954154 - - hypothetical protein JCGZ_17631 [Jatropha curcas]
7 Hb_001488_370 0.231375476 - - Esterase PIR7B, putative [Ricinus communis]
8 Hb_098533_020 0.2323180008 - - PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
9 Hb_000152_100 0.2370209219 - - PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Jatropha curcas]
10 Hb_004787_040 0.2412722227 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004679_060 0.241674501 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005147_010 0.2475705408 - - PREDICTED: uncharacterized protein LOC105629670 [Jatropha curcas]
13 Hb_006907_080 0.2529822461 - - PREDICTED: RPM1-interacting protein 4-like [Jatropha curcas]
14 Hb_000371_070 0.2547810455 - - PREDICTED: uncharacterized protein LOC103863319 [Brassica rapa]
15 Hb_000031_080 0.255446713 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
16 Hb_156850_060 0.2604749152 - - PREDICTED: uncharacterized protein LOC105635248 [Jatropha curcas]
17 Hb_001951_250 0.2663169827 - - -
18 Hb_000200_200 0.268056111 - - PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Jatropha curcas]
19 Hb_010506_010 0.2704182469 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
20 Hb_001164_030 0.2718591282 - - GMP synthase [glutamine-hydrolyzing] subunit A, putative [Ricinus communis]

Gene co-expression network

sample Hb_009974_020 Hb_009974_020 Hb_003777_360 Hb_003777_360 Hb_009974_020--Hb_003777_360 Hb_000117_100 Hb_000117_100 Hb_009974_020--Hb_000117_100 Hb_140049_010 Hb_140049_010 Hb_009974_020--Hb_140049_010 Hb_001141_110 Hb_001141_110 Hb_009974_020--Hb_001141_110 Hb_007558_020 Hb_007558_020 Hb_009974_020--Hb_007558_020 Hb_001488_370 Hb_001488_370 Hb_009974_020--Hb_001488_370 Hb_003777_360--Hb_000117_100 Hb_000836_490 Hb_000836_490 Hb_003777_360--Hb_000836_490 Hb_028271_020 Hb_028271_020 Hb_003777_360--Hb_028271_020 Hb_000130_230 Hb_000130_230 Hb_003777_360--Hb_000130_230 Hb_003777_360--Hb_001488_370 Hb_000732_210 Hb_000732_210 Hb_000117_100--Hb_000732_210 Hb_007885_050 Hb_007885_050 Hb_000117_100--Hb_007885_050 Hb_000117_100--Hb_000836_490 Hb_004787_040 Hb_004787_040 Hb_000117_100--Hb_004787_040 Hb_006907_080 Hb_006907_080 Hb_140049_010--Hb_006907_080 Hb_010506_010 Hb_010506_010 Hb_140049_010--Hb_010506_010 Hb_000418_080 Hb_000418_080 Hb_140049_010--Hb_000418_080 Hb_000120_150 Hb_000120_150 Hb_140049_010--Hb_000120_150 Hb_140049_010--Hb_007558_020 Hb_140049_010--Hb_004787_040 Hb_004129_160 Hb_004129_160 Hb_001141_110--Hb_004129_160 Hb_005656_190 Hb_005656_190 Hb_001141_110--Hb_005656_190 Hb_001369_600 Hb_001369_600 Hb_001141_110--Hb_001369_600 Hb_000200_200 Hb_000200_200 Hb_001141_110--Hb_000200_200 Hb_003007_010 Hb_003007_010 Hb_001141_110--Hb_003007_010 Hb_007254_080 Hb_007254_080 Hb_001141_110--Hb_007254_080 Hb_000394_110 Hb_000394_110 Hb_007558_020--Hb_000394_110 Hb_001771_080 Hb_001771_080 Hb_007558_020--Hb_001771_080 Hb_000343_180 Hb_000343_180 Hb_007558_020--Hb_000343_180 Hb_002849_140 Hb_002849_140 Hb_007558_020--Hb_002849_140 Hb_007558_020--Hb_006907_080 Hb_012545_050 Hb_012545_050 Hb_001488_370--Hb_012545_050 Hb_012053_050 Hb_012053_050 Hb_001488_370--Hb_012053_050 Hb_001488_370--Hb_001369_600 Hb_000997_190 Hb_000997_190 Hb_001488_370--Hb_000997_190 Hb_001437_130 Hb_001437_130 Hb_001488_370--Hb_001437_130 Hb_001776_170 Hb_001776_170 Hb_001488_370--Hb_001776_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0372866 0.041782 0.0142789 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0426097 0.134066 0.0622158 0.0268737 0

CAGE analysis