Hb_000130_230

Information

Type transcription factor
Description TF Family: ERF
Location Contig130: 198317-198712
Sequence    

Annotation

kegg
ID tcc:TCM_004061
description Integrase-type DNA-binding superfamily protein, putative
nr
ID XP_012085331.1
description PREDICTED: ethylene-responsive transcription factor ERF098-like [Jatropha curcas]
swissprot
ID Q9LTC5
description Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=1 SV=1
trembl
ID A0A067JUN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17701 PE=4 SV=1
Gene Ontology
ID GO:0005634
description ethylene-responsive transcription factor erf098-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000130_230 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098-like [Jatropha curcas]
2 Hb_001951_250 0.1434588202 - - -
3 Hb_003777_360 0.205348851 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
4 Hb_003891_080 0.2188624291 - - hypothetical protein JCGZ_16710 [Jatropha curcas]
5 Hb_001477_150 0.2512903555 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_001767_050 0.2612287845 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000892_070 0.2634439993 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]
8 Hb_002067_140 0.2750360283 - - -
9 Hb_000943_060 0.2780270522 - - PREDICTED: uncharacterized protein LOC105635589 [Jatropha curcas]
10 Hb_010519_030 0.2822864652 - - -
11 Hb_026687_010 0.2869575119 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Eucalyptus grandis]
12 Hb_000371_070 0.2881885834 - - PREDICTED: uncharacterized protein LOC103863319 [Brassica rapa]
13 Hb_002588_040 0.291207065 - - Pathogenesis-related protein 1 [Theobroma cacao]
14 Hb_009974_020 0.2931651142 - - PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
15 Hb_001146_060 0.2933229891 transcription factor TF Family: bHLH lMYC5 [Hevea brasiliensis]
16 Hb_001488_370 0.2935059973 - - Esterase PIR7B, putative [Ricinus communis]
17 Hb_089160_010 0.2957121808 - - PREDICTED: uncharacterized protein LOC105793196 [Gossypium raimondii]
18 Hb_001396_090 0.2965620202 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Jatropha curcas]
19 Hb_002382_030 0.2969019319 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like isoform X2 [Malus domestica]
20 Hb_002478_020 0.2971460103 - - hypothetical protein POPTR_0010s19120g [Populus trichocarpa]

Gene co-expression network

sample Hb_000130_230 Hb_000130_230 Hb_001951_250 Hb_001951_250 Hb_000130_230--Hb_001951_250 Hb_003777_360 Hb_003777_360 Hb_000130_230--Hb_003777_360 Hb_003891_080 Hb_003891_080 Hb_000130_230--Hb_003891_080 Hb_001477_150 Hb_001477_150 Hb_000130_230--Hb_001477_150 Hb_001767_050 Hb_001767_050 Hb_000130_230--Hb_001767_050 Hb_000892_070 Hb_000892_070 Hb_000130_230--Hb_000892_070 Hb_000371_070 Hb_000371_070 Hb_001951_250--Hb_000371_070 Hb_001951_250--Hb_003777_360 Hb_001951_250--Hb_001477_150 Hb_007426_050 Hb_007426_050 Hb_001951_250--Hb_007426_050 Hb_002067_140 Hb_002067_140 Hb_001951_250--Hb_002067_140 Hb_000117_100 Hb_000117_100 Hb_003777_360--Hb_000117_100 Hb_009974_020 Hb_009974_020 Hb_003777_360--Hb_009974_020 Hb_000836_490 Hb_000836_490 Hb_003777_360--Hb_000836_490 Hb_028271_020 Hb_028271_020 Hb_003777_360--Hb_028271_020 Hb_001488_370 Hb_001488_370 Hb_003777_360--Hb_001488_370 Hb_000062_300 Hb_000062_300 Hb_003891_080--Hb_000062_300 Hb_000656_410 Hb_000656_410 Hb_003891_080--Hb_000656_410 Hb_033834_050 Hb_033834_050 Hb_003891_080--Hb_033834_050 Hb_003891_080--Hb_003777_360 Hb_042871_010 Hb_042871_010 Hb_003891_080--Hb_042871_010 Hb_008438_010 Hb_008438_010 Hb_001477_150--Hb_008438_010 Hb_003020_170 Hb_003020_170 Hb_001477_150--Hb_003020_170 Hb_000943_060 Hb_000943_060 Hb_001477_150--Hb_000943_060 Hb_002046_070 Hb_002046_070 Hb_001477_150--Hb_002046_070 Hb_001369_210 Hb_001369_210 Hb_001767_050--Hb_001369_210 Hb_000352_160 Hb_000352_160 Hb_001767_050--Hb_000352_160 Hb_000962_080 Hb_000962_080 Hb_001767_050--Hb_000962_080 Hb_001146_060 Hb_001146_060 Hb_001767_050--Hb_001146_060 Hb_002588_040 Hb_002588_040 Hb_001767_050--Hb_002588_040 Hb_001247_330 Hb_001247_330 Hb_001767_050--Hb_001247_330 Hb_002725_060 Hb_002725_060 Hb_000892_070--Hb_002725_060 Hb_004994_110 Hb_004994_110 Hb_000892_070--Hb_004994_110 Hb_167711_040 Hb_167711_040 Hb_000892_070--Hb_167711_040 Hb_007757_140 Hb_007757_140 Hb_000892_070--Hb_007757_140 Hb_000892_070--Hb_001951_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.19793 0.0674209 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.406353 4.46859 2.03693 0.548151 0

CAGE analysis