Hb_008438_010

Information

Type -
Description -
Location Contig8438: 10-1311
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa015840mg
description hypothetical protein
nr
ID XP_009799734.1
description PREDICTED: uncharacterized protein LOC104245771 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID M5XLX2
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015840mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008438_010 0.0 - - PREDICTED: uncharacterized protein LOC104245771 [Nicotiana sylvestris]
2 Hb_007157_030 0.1889410923 - - PREDICTED: protein LURP-one-related 6-like [Jatropha curcas]
3 Hb_001477_150 0.2208621125 - - o-methyltransferase, putative [Ricinus communis]
4 Hb_012371_010 0.2214039806 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
5 Hb_002660_060 0.2776359276 - - PREDICTED: uncharacterized protein LOC105642215 [Jatropha curcas]
6 Hb_002046_070 0.2795662447 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica]
7 Hb_003055_170 0.3071534536 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 25 isoform X1 [Jatropha curcas]
8 Hb_007757_140 0.3122574533 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
9 Hb_001930_040 0.3193901959 - - PREDICTED: serine acetyltransferase 1, chloroplastic-like [Beta vulgaris subsp. vulgaris]
10 Hb_000676_270 0.322261856 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]
11 Hb_000943_060 0.3283945168 - - PREDICTED: uncharacterized protein LOC105635589 [Jatropha curcas]
12 Hb_080749_010 0.3304340539 - - PREDICTED: putative DNA-binding protein ESCAROLA [Populus euphratica]
13 Hb_002805_020 0.3397527973 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
14 Hb_004032_260 0.3413171531 - - PREDICTED: uncharacterized protein LOC105635147 [Jatropha curcas]
15 Hb_012052_070 0.3499042321 - - PREDICTED: uncharacterized protein LOC105635597 [Jatropha curcas]
16 Hb_005162_100 0.3500449698 - - ATP binding protein, putative [Ricinus communis]
17 Hb_010506_010 0.350678759 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
18 Hb_001080_010 0.3536662103 - - -
19 Hb_000671_160 0.3573455459 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
20 Hb_163206_010 0.3602434586 - - hypothetical protein JCGZ_01203 [Jatropha curcas]

Gene co-expression network

sample Hb_008438_010 Hb_008438_010 Hb_007157_030 Hb_007157_030 Hb_008438_010--Hb_007157_030 Hb_001477_150 Hb_001477_150 Hb_008438_010--Hb_001477_150 Hb_012371_010 Hb_012371_010 Hb_008438_010--Hb_012371_010 Hb_002660_060 Hb_002660_060 Hb_008438_010--Hb_002660_060 Hb_002046_070 Hb_002046_070 Hb_008438_010--Hb_002046_070 Hb_003055_170 Hb_003055_170 Hb_008438_010--Hb_003055_170 Hb_007157_030--Hb_012371_010 Hb_163206_010 Hb_163206_010 Hb_007157_030--Hb_163206_010 Hb_007157_030--Hb_002660_060 Hb_000671_160 Hb_000671_160 Hb_007157_030--Hb_000671_160 Hb_000117_100 Hb_000117_100 Hb_007157_030--Hb_000117_100 Hb_003020_170 Hb_003020_170 Hb_001477_150--Hb_003020_170 Hb_000943_060 Hb_000943_060 Hb_001477_150--Hb_000943_060 Hb_001951_250 Hb_001951_250 Hb_001477_150--Hb_001951_250 Hb_000130_230 Hb_000130_230 Hb_001477_150--Hb_000130_230 Hb_001477_150--Hb_002046_070 Hb_012371_010--Hb_002660_060 Hb_001141_290 Hb_001141_290 Hb_012371_010--Hb_001141_290 Hb_012371_010--Hb_001477_150 Hb_000398_050 Hb_000398_050 Hb_012371_010--Hb_000398_050 Hb_002805_020 Hb_002805_020 Hb_002660_060--Hb_002805_020 Hb_002660_060--Hb_000671_160 Hb_000671_170 Hb_000671_170 Hb_002660_060--Hb_000671_170 Hb_002486_010 Hb_002486_010 Hb_002660_060--Hb_002486_010 Hb_000676_270 Hb_000676_270 Hb_002660_060--Hb_000676_270 Hb_000554_030 Hb_000554_030 Hb_002660_060--Hb_000554_030 Hb_004032_260 Hb_004032_260 Hb_002046_070--Hb_004032_260 Hb_012053_060 Hb_012053_060 Hb_002046_070--Hb_012053_060 Hb_006573_180 Hb_006573_180 Hb_002046_070--Hb_006573_180 Hb_023732_040 Hb_023732_040 Hb_002046_070--Hb_023732_040 Hb_000990_060 Hb_000990_060 Hb_002046_070--Hb_000990_060 Hb_000077_060 Hb_000077_060 Hb_002046_070--Hb_000077_060 Hb_015970_010 Hb_015970_010 Hb_003055_170--Hb_015970_010 Hb_011437_030 Hb_011437_030 Hb_003055_170--Hb_011437_030 Hb_003055_170--Hb_002660_060 Hb_000192_110 Hb_000192_110 Hb_003055_170--Hb_000192_110 Hb_026048_020 Hb_026048_020 Hb_003055_170--Hb_026048_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0355934 0 0.0167536 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0384683 0.070937 0.0154594 0

CAGE analysis