Hb_026048_020

Information

Type -
Description -
Location Contig26048: 40640-41278
Sequence    

Annotation

kegg
ID rcu:RCOM_1689310
description hypothetical protein
nr
ID XP_012086807.1
description PREDICTED: uncharacterized protein LOC105645738 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZD4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20526 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026048_020 0.0 - - PREDICTED: uncharacterized protein LOC105645738 [Jatropha curcas]
2 Hb_002110_020 0.1722767685 - - PREDICTED: transcription factor bHLH145 [Jatropha curcas]
3 Hb_000239_020 0.1815772287 - - PREDICTED: F-box/kelch-repeat protein At5g43190 [Jatropha curcas]
4 Hb_031862_130 0.216200192 - - transcription factor, putative [Ricinus communis]
5 Hb_001930_040 0.2176831845 - - PREDICTED: serine acetyltransferase 1, chloroplastic-like [Beta vulgaris subsp. vulgaris]
6 Hb_000069_170 0.2212222927 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
7 Hb_004586_210 0.2231331505 - - transcription factor, putative [Ricinus communis]
8 Hb_004846_160 0.2294313688 - - -
9 Hb_027393_030 0.2298182573 - - PREDICTED: uncharacterized protein At5g39865 [Jatropha curcas]
10 Hb_005542_060 0.232546955 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_004200_020 0.235224066 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
12 Hb_000215_080 0.2396419107 - - PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
13 Hb_000731_260 0.2417551378 - - hypothetical protein RCOM_0905090 [Ricinus communis]
14 Hb_001486_010 0.2427564373 - - adenylsulfate kinase, putative [Ricinus communis]
15 Hb_000126_110 0.2459084118 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X3 [Populus euphratica]
16 Hb_000990_060 0.2462814649 - - PREDICTED: protein EMBRYONIC FLOWER 1 [Jatropha curcas]
17 Hb_004785_140 0.2465265722 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X2 [Jatropha curcas]
18 Hb_023344_080 0.2468735696 - - PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
19 Hb_003972_080 0.2511060384 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
20 Hb_000392_310 0.2513626793 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_026048_020 Hb_026048_020 Hb_002110_020 Hb_002110_020 Hb_026048_020--Hb_002110_020 Hb_000239_020 Hb_000239_020 Hb_026048_020--Hb_000239_020 Hb_031862_130 Hb_031862_130 Hb_026048_020--Hb_031862_130 Hb_001930_040 Hb_001930_040 Hb_026048_020--Hb_001930_040 Hb_000069_170 Hb_000069_170 Hb_026048_020--Hb_000069_170 Hb_004586_210 Hb_004586_210 Hb_026048_020--Hb_004586_210 Hb_002110_020--Hb_004586_210 Hb_002045_180 Hb_002045_180 Hb_002110_020--Hb_002045_180 Hb_001314_020 Hb_001314_020 Hb_002110_020--Hb_001314_020 Hb_000116_010 Hb_000116_010 Hb_002110_020--Hb_000116_010 Hb_004410_100 Hb_004410_100 Hb_002110_020--Hb_004410_100 Hb_004785_140 Hb_004785_140 Hb_002110_020--Hb_004785_140 Hb_027393_030 Hb_027393_030 Hb_000239_020--Hb_027393_030 Hb_000367_260 Hb_000367_260 Hb_000239_020--Hb_000367_260 Hb_000549_040 Hb_000549_040 Hb_000239_020--Hb_000549_040 Hb_001504_330 Hb_001504_330 Hb_000239_020--Hb_001504_330 Hb_004993_060 Hb_004993_060 Hb_000239_020--Hb_004993_060 Hb_005542_060 Hb_005542_060 Hb_000239_020--Hb_005542_060 Hb_000215_080 Hb_000215_080 Hb_031862_130--Hb_000215_080 Hb_031862_130--Hb_000069_170 Hb_008695_140 Hb_008695_140 Hb_031862_130--Hb_008695_140 Hb_000011_330 Hb_000011_330 Hb_031862_130--Hb_000011_330 Hb_000723_200 Hb_000723_200 Hb_031862_130--Hb_000723_200 Hb_031862_130--Hb_005542_060 Hb_001930_040--Hb_000239_020 Hb_008948_040 Hb_008948_040 Hb_001930_040--Hb_008948_040 Hb_005060_020 Hb_005060_020 Hb_001930_040--Hb_005060_020 Hb_005162_100 Hb_005162_100 Hb_001930_040--Hb_005162_100 Hb_005489_100 Hb_005489_100 Hb_001930_040--Hb_005489_100 Hb_002194_090 Hb_002194_090 Hb_000069_170--Hb_002194_090 Hb_000069_170--Hb_000215_080 Hb_001662_060 Hb_001662_060 Hb_000069_170--Hb_001662_060 Hb_007765_020 Hb_007765_020 Hb_000069_170--Hb_007765_020 Hb_000069_170--Hb_008695_140 Hb_004586_210--Hb_031862_130 Hb_004586_210--Hb_027393_030 Hb_004586_210--Hb_000116_010 Hb_000007_180 Hb_000007_180 Hb_004586_210--Hb_000007_180 Hb_004204_170 Hb_004204_170 Hb_004586_210--Hb_004204_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.02246 10.4201 2.75725 13.1891 1.33555 2.77052
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.59072 5.71706 34.0934 7.27508 1.27257

CAGE analysis