Hb_000215_080

Information

Type -
Description -
Location Contig215: 53032-61756
Sequence    

Annotation

kegg
ID rcu:RCOM_1049380
description ceramide glucosyltransferase, putative
nr
ID XP_012076865.1
description PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KFP0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07364 PE=4 SV=1
Gene Ontology
ID GO:0016757
description ceramide glucosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22169: 53035-53314 , PASA_asmbl_22170: 54274-54465 , PASA_asmbl_22171: 56344-61618
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000215_080 0.0 - - PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
2 Hb_031862_130 0.1192219876 - - transcription factor, putative [Ricinus communis]
3 Hb_008695_140 0.1344807533 - - Vacuolar protein sorting-associated protein VPS9, putative [Ricinus communis]
4 Hb_001946_410 0.1435500224 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
5 Hb_005285_020 0.1469068524 - - -
6 Hb_005542_060 0.1495474663 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_000069_170 0.1499036904 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
8 Hb_005228_070 0.1551948172 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial [Jatropha curcas]
9 Hb_000197_250 0.1593885791 - - Chaperone protein dnaJ, putative [Ricinus communis]
10 Hb_001195_360 0.1639620133 - - PREDICTED: random slug protein 5 [Jatropha curcas]
11 Hb_000549_040 0.1651977364 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Jatropha curcas]
12 Hb_000567_380 0.1681929584 - - ubiquitin specific protease 39 and snrnp assembly factor, putative [Ricinus communis]
13 Hb_010174_080 0.1710389715 - - -
14 Hb_000092_010 0.1713188434 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646502 [Jatropha curcas]
15 Hb_002043_050 0.1716858808 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Jatropha curcas]
16 Hb_000002_400 0.175470358 transcription factor TF Family: Orphans PREDICTED: ethylene receptor 2 [Jatropha curcas]
17 Hb_000723_200 0.1762191688 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
18 Hb_004785_140 0.1772925968 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X2 [Jatropha curcas]
19 Hb_000096_010 0.1777604646 - - PREDICTED: U-box domain-containing protein 30-like [Citrus sinensis]
20 Hb_001486_010 0.1787432029 - - adenylsulfate kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000215_080 Hb_000215_080 Hb_031862_130 Hb_031862_130 Hb_000215_080--Hb_031862_130 Hb_008695_140 Hb_008695_140 Hb_000215_080--Hb_008695_140 Hb_001946_410 Hb_001946_410 Hb_000215_080--Hb_001946_410 Hb_005285_020 Hb_005285_020 Hb_000215_080--Hb_005285_020 Hb_005542_060 Hb_005542_060 Hb_000215_080--Hb_005542_060 Hb_000069_170 Hb_000069_170 Hb_000215_080--Hb_000069_170 Hb_031862_130--Hb_000069_170 Hb_031862_130--Hb_008695_140 Hb_000011_330 Hb_000011_330 Hb_031862_130--Hb_000011_330 Hb_000723_200 Hb_000723_200 Hb_031862_130--Hb_000723_200 Hb_031862_130--Hb_005542_060 Hb_000567_380 Hb_000567_380 Hb_008695_140--Hb_000567_380 Hb_002205_190 Hb_002205_190 Hb_008695_140--Hb_002205_190 Hb_007765_020 Hb_007765_020 Hb_008695_140--Hb_007765_020 Hb_008695_140--Hb_000011_330 Hb_008695_140--Hb_001946_410 Hb_004785_140 Hb_004785_140 Hb_008695_140--Hb_004785_140 Hb_001946_410--Hb_002205_190 Hb_001946_410--Hb_000567_380 Hb_000116_010 Hb_000116_010 Hb_001946_410--Hb_000116_010 Hb_001946_410--Hb_000011_330 Hb_001946_410--Hb_004785_140 Hb_005285_020--Hb_008695_140 Hb_005285_020--Hb_031862_130 Hb_000197_250 Hb_000197_250 Hb_005285_020--Hb_000197_250 Hb_000854_040 Hb_000854_040 Hb_005285_020--Hb_000854_040 Hb_000948_150 Hb_000948_150 Hb_005285_020--Hb_000948_150 Hb_005542_060--Hb_004785_140 Hb_027393_030 Hb_027393_030 Hb_005542_060--Hb_027393_030 Hb_002205_130 Hb_002205_130 Hb_005542_060--Hb_002205_130 Hb_011030_020 Hb_011030_020 Hb_005542_060--Hb_011030_020 Hb_000239_020 Hb_000239_020 Hb_005542_060--Hb_000239_020 Hb_000748_130 Hb_000748_130 Hb_005542_060--Hb_000748_130 Hb_002194_090 Hb_002194_090 Hb_000069_170--Hb_002194_090 Hb_001662_060 Hb_001662_060 Hb_000069_170--Hb_001662_060 Hb_000069_170--Hb_007765_020 Hb_000069_170--Hb_008695_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.99615 9.1437 19.6495 12.8782 8.63034 8.37351
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.20952 13.3262 47.5758 11.273 6.23932

CAGE analysis