Hb_007765_020

Information

Type -
Description -
Location Contig7765: 10323-18251
Sequence    

Annotation

kegg
ID pop:POPTR_0001s25440g
description POPTRDRAFT_815319; hypothetical protein
nr
ID KDP46573.1
description hypothetical protein JCGZ_08545 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LGU5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08545 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007765_020 0.0 - - hypothetical protein JCGZ_08545 [Jatropha curcas]
2 Hb_000092_010 0.0882879873 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646502 [Jatropha curcas]
3 Hb_003976_030 0.0957400208 - - PREDICTED: probable phenylalanine--tRNA ligase beta subunit [Jatropha curcas]
4 Hb_001014_040 0.1007747496 - - PREDICTED: uncharacterized protein LOC105647308 [Jatropha curcas]
5 Hb_004079_030 0.1010863078 - - PREDICTED: uncharacterized protein LOC105637701 isoform X2 [Jatropha curcas]
6 Hb_001662_060 0.1112192551 - - SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao]
7 Hb_005625_020 0.111457093 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 [Jatropha curcas]
8 Hb_008695_140 0.1124340456 - - Vacuolar protein sorting-associated protein VPS9, putative [Ricinus communis]
9 Hb_000096_010 0.1127507582 - - PREDICTED: U-box domain-containing protein 30-like [Citrus sinensis]
10 Hb_000723_200 0.1135578991 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
11 Hb_001811_030 0.118333804 - - Beta-ureidopropionase, putative [Ricinus communis]
12 Hb_000138_110 0.1189801061 - - PREDICTED: probable protein phosphatase 2C 68 [Jatropha curcas]
13 Hb_000130_050 0.1189872529 - - 14-3-3 protein, putative [Ricinus communis]
14 Hb_000723_130 0.124400226 desease resistance Gene Name: CDC48_N cell division cycle protein 48 [Hevea brasiliensis]
15 Hb_005548_010 0.1246022189 - - PREDICTED: DNA repair protein RAD51 homolog 2 [Jatropha curcas]
16 Hb_002205_190 0.1265834103 - - PREDICTED: U-box domain-containing protein 62-like [Jatropha curcas]
17 Hb_002217_300 0.1266792822 - - PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Jatropha curcas]
18 Hb_000928_020 0.1271916051 - - hypothetical protein CICLE_v10013682mg [Citrus clementina]
19 Hb_000334_150 0.1275872966 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000538_070 0.1288929092 - - PREDICTED: coatomer subunit delta [Jatropha curcas]

Gene co-expression network

sample Hb_007765_020 Hb_007765_020 Hb_000092_010 Hb_000092_010 Hb_007765_020--Hb_000092_010 Hb_003976_030 Hb_003976_030 Hb_007765_020--Hb_003976_030 Hb_001014_040 Hb_001014_040 Hb_007765_020--Hb_001014_040 Hb_004079_030 Hb_004079_030 Hb_007765_020--Hb_004079_030 Hb_001662_060 Hb_001662_060 Hb_007765_020--Hb_001662_060 Hb_005625_020 Hb_005625_020 Hb_007765_020--Hb_005625_020 Hb_000138_110 Hb_000138_110 Hb_000092_010--Hb_000138_110 Hb_000092_010--Hb_003976_030 Hb_012325_020 Hb_012325_020 Hb_000092_010--Hb_012325_020 Hb_000723_130 Hb_000723_130 Hb_000092_010--Hb_000723_130 Hb_000723_200 Hb_000723_200 Hb_000092_010--Hb_000723_200 Hb_003976_030--Hb_012325_020 Hb_000280_080 Hb_000280_080 Hb_003976_030--Hb_000280_080 Hb_000011_330 Hb_000011_330 Hb_003976_030--Hb_000011_330 Hb_005348_140 Hb_005348_140 Hb_003976_030--Hb_005348_140 Hb_001892_020 Hb_001892_020 Hb_003976_030--Hb_001892_020 Hb_000108_070 Hb_000108_070 Hb_001014_040--Hb_000108_070 Hb_001811_030 Hb_001811_030 Hb_001014_040--Hb_001811_030 Hb_031862_110 Hb_031862_110 Hb_001014_040--Hb_031862_110 Hb_002005_020 Hb_002005_020 Hb_001014_040--Hb_002005_020 Hb_002374_100 Hb_002374_100 Hb_001014_040--Hb_002374_100 Hb_000130_050 Hb_000130_050 Hb_001014_040--Hb_000130_050 Hb_004079_030--Hb_000138_110 Hb_002027_040 Hb_002027_040 Hb_004079_030--Hb_002027_040 Hb_004079_030--Hb_001811_030 Hb_000059_050 Hb_000059_050 Hb_004079_030--Hb_000059_050 Hb_004079_030--Hb_002005_020 Hb_119600_070 Hb_119600_070 Hb_004079_030--Hb_119600_070 Hb_001662_060--Hb_004079_030 Hb_008159_010 Hb_008159_010 Hb_001662_060--Hb_008159_010 Hb_001662_060--Hb_000059_050 Hb_001662_060--Hb_000130_050 Hb_001662_060--Hb_000092_010 Hb_000080_190 Hb_000080_190 Hb_005625_020--Hb_000080_190 Hb_002687_110 Hb_002687_110 Hb_005625_020--Hb_002687_110 Hb_002769_050 Hb_002769_050 Hb_005625_020--Hb_002769_050 Hb_004738_040 Hb_004738_040 Hb_005625_020--Hb_004738_040 Hb_000898_040 Hb_000898_040 Hb_005625_020--Hb_000898_040 Hb_154648_010 Hb_154648_010 Hb_005625_020--Hb_154648_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.70027 2.03741 3.34173 3.87069 3.10255 6.02638
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.82693 3.10072 13.0715 4.53424 2.67311

CAGE analysis