Hb_005162_100

Information

Type -
Description -
Location Contig5162: 64483-66972
Sequence    

Annotation

kegg
ID rcu:RCOM_1335800
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_002523161.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9FLW0
description Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1
trembl
ID B9SB01
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_1335800 PE=3 SV=1
Gene Ontology
ID GO:0005886
description probable receptor-like protein kinase at5g24010

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005162_100 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_001102_210 0.1763285492 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Jatropha curcas]
3 Hb_000059_010 0.1901872182 - - amino acid binding protein, putative [Ricinus communis]
4 Hb_000815_290 0.1946509081 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
5 Hb_001123_100 0.1979282625 - - PREDICTED: uncharacterized protein LOC105647337 isoform X1 [Jatropha curcas]
6 Hb_083380_010 0.206461653 - - -
7 Hb_005356_040 0.2075472674 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
8 Hb_010506_010 0.217184319 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
9 Hb_005496_090 0.2175065104 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
10 Hb_000140_360 0.2198763013 - - PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]
11 Hb_001930_040 0.2212507007 - - PREDICTED: serine acetyltransferase 1, chloroplastic-like [Beta vulgaris subsp. vulgaris]
12 Hb_002078_440 0.2253346764 transcription factor TF Family: Orphans PREDICTED: histidine kinase 3 isoform X1 [Jatropha curcas]
13 Hb_007741_100 0.2273332861 transcription factor TF Family: GRAS PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 6 [Jatropha curcas]
14 Hb_001377_420 0.2302420866 - - conserved hypothetical protein [Ricinus communis]
15 Hb_130719_010 0.2309290442 - - V-type proton ATPase subunit E [Hevea brasiliensis]
16 Hb_000007_140 0.2323771893 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Jatropha curcas]
17 Hb_001619_040 0.2341738323 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
18 Hb_000928_110 0.2371076588 - - PREDICTED: uncharacterized protein LOC105632499 isoform X1 [Jatropha curcas]
19 Hb_000946_100 0.2375640612 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
20 Hb_001604_150 0.2403311026 - - PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nelumbo nucifera]

Gene co-expression network

sample Hb_005162_100 Hb_005162_100 Hb_001102_210 Hb_001102_210 Hb_005162_100--Hb_001102_210 Hb_000059_010 Hb_000059_010 Hb_005162_100--Hb_000059_010 Hb_000815_290 Hb_000815_290 Hb_005162_100--Hb_000815_290 Hb_001123_100 Hb_001123_100 Hb_005162_100--Hb_001123_100 Hb_083380_010 Hb_083380_010 Hb_005162_100--Hb_083380_010 Hb_005356_040 Hb_005356_040 Hb_005162_100--Hb_005356_040 Hb_002078_440 Hb_002078_440 Hb_001102_210--Hb_002078_440 Hb_013405_140 Hb_013405_140 Hb_001102_210--Hb_013405_140 Hb_000140_360 Hb_000140_360 Hb_001102_210--Hb_000140_360 Hb_001102_210--Hb_000059_010 Hb_000340_310 Hb_000340_310 Hb_001102_210--Hb_000340_310 Hb_001102_210--Hb_000815_290 Hb_000059_010--Hb_000815_290 Hb_130719_010 Hb_130719_010 Hb_000059_010--Hb_130719_010 Hb_000059_010--Hb_002078_440 Hb_001377_420 Hb_001377_420 Hb_000059_010--Hb_001377_420 Hb_000771_060 Hb_000771_060 Hb_000059_010--Hb_000771_060 Hb_000815_290--Hb_000771_060 Hb_005054_260 Hb_005054_260 Hb_000815_290--Hb_005054_260 Hb_005496_090 Hb_005496_090 Hb_000815_290--Hb_005496_090 Hb_004089_020 Hb_004089_020 Hb_000815_290--Hb_004089_020 Hb_000815_290--Hb_130719_010 Hb_005054_270 Hb_005054_270 Hb_001123_100--Hb_005054_270 Hb_001123_100--Hb_000140_360 Hb_004162_180 Hb_004162_180 Hb_001123_100--Hb_004162_180 Hb_001123_100--Hb_001102_210 Hb_006738_030 Hb_006738_030 Hb_001123_100--Hb_006738_030 Hb_083380_010--Hb_005496_090 Hb_138585_040 Hb_138585_040 Hb_083380_010--Hb_138585_040 Hb_001157_080 Hb_001157_080 Hb_083380_010--Hb_001157_080 Hb_001172_100 Hb_001172_100 Hb_083380_010--Hb_001172_100 Hb_005278_040 Hb_005278_040 Hb_083380_010--Hb_005278_040 Hb_083380_010--Hb_130719_010 Hb_000465_270 Hb_000465_270 Hb_005356_040--Hb_000465_270 Hb_000928_110 Hb_000928_110 Hb_005356_040--Hb_000928_110 Hb_000007_140 Hb_000007_140 Hb_005356_040--Hb_000007_140 Hb_000110_140 Hb_000110_140 Hb_005356_040--Hb_000110_140 Hb_004800_100 Hb_004800_100 Hb_005356_040--Hb_004800_100 Hb_001504_330 Hb_001504_330 Hb_005356_040--Hb_001504_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.77708 5.13541 0.728567 7.55087 0.43615 0.508149
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.5616 13.5727 12.9628 4.2587 5.60927

CAGE analysis