Hb_023732_040

Information

Type -
Description -
Location Contig23732: 55547-57073
Sequence    

Annotation

kegg
ID rcu:RCOM_0792010
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002529058.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9ZUX1
description Cytochrome P450 94C1 OS=Arabidopsis thaliana GN=CYP94C1 PE=2 SV=1
trembl
ID B9SST9
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0792010 PE=3 SV=1
Gene Ontology
ID GO:0043231
description cytochrome p450 94c1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023732_040 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000477_080 0.1948056205 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
3 Hb_000172_570 0.2028373773 - - PREDICTED: uncharacterized protein LOC105636518 isoform X1 [Jatropha curcas]
4 Hb_001277_090 0.2067824006 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
5 Hb_004460_010 0.234171335 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
6 Hb_009314_010 0.238485011 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
7 Hb_000094_130 0.2396289444 - - PREDICTED: random slug protein 5 [Jatropha curcas]
8 Hb_002046_070 0.2400935118 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica]
9 Hb_000964_060 0.2405168785 - - hypothetical protein POPTR_0009s06660g [Populus trichocarpa]
10 Hb_002073_120 0.242475655 - - Adenine nucleotide alpha hydrolases-like superfamily protein [Theobroma cacao]
11 Hb_000141_030 0.2427932012 - - PREDICTED: scarecrow-like protein 22 [Jatropha curcas]
12 Hb_004052_010 0.2437747596 - - PREDICTED: ninja-family protein AFP3-like isoform X2 [Jatropha curcas]
13 Hb_000990_060 0.2448642081 - - PREDICTED: protein EMBRYONIC FLOWER 1 [Jatropha curcas]
14 Hb_006573_180 0.2453392507 transcription factor TF Family: WRKY hypothetical protein RCOM_1581940 [Ricinus communis]
15 Hb_000327_220 0.2478684299 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
16 Hb_001799_080 0.2482682441 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
17 Hb_000802_120 0.2523662786 - - -
18 Hb_011360_080 0.253427313 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
19 Hb_000141_240 0.2561418821 - - PREDICTED: protein NRT1/ PTR FAMILY 6.3 isoform X1 [Jatropha curcas]
20 Hb_000161_150 0.2570716107 - - PREDICTED: protein argonaute 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_023732_040 Hb_023732_040 Hb_000477_080 Hb_000477_080 Hb_023732_040--Hb_000477_080 Hb_000172_570 Hb_000172_570 Hb_023732_040--Hb_000172_570 Hb_001277_090 Hb_001277_090 Hb_023732_040--Hb_001277_090 Hb_004460_010 Hb_004460_010 Hb_023732_040--Hb_004460_010 Hb_009314_010 Hb_009314_010 Hb_023732_040--Hb_009314_010 Hb_000094_130 Hb_000094_130 Hb_023732_040--Hb_000094_130 Hb_011360_080 Hb_011360_080 Hb_000477_080--Hb_011360_080 Hb_000141_030 Hb_000141_030 Hb_000477_080--Hb_000141_030 Hb_000368_060 Hb_000368_060 Hb_000477_080--Hb_000368_060 Hb_004429_070 Hb_004429_070 Hb_000477_080--Hb_004429_070 Hb_000562_040 Hb_000562_040 Hb_000477_080--Hb_000562_040 Hb_000103_110 Hb_000103_110 Hb_000477_080--Hb_000103_110 Hb_002073_120 Hb_002073_120 Hb_000172_570--Hb_002073_120 Hb_000227_200 Hb_000227_200 Hb_000172_570--Hb_000227_200 Hb_000172_570--Hb_000141_030 Hb_003599_070 Hb_003599_070 Hb_000172_570--Hb_003599_070 Hb_000995_070 Hb_000995_070 Hb_000172_570--Hb_000995_070 Hb_000784_040 Hb_000784_040 Hb_000172_570--Hb_000784_040 Hb_001277_090--Hb_000094_130 Hb_000327_220 Hb_000327_220 Hb_001277_090--Hb_000327_220 Hb_001277_090--Hb_000141_030 Hb_006153_080 Hb_006153_080 Hb_001277_090--Hb_006153_080 Hb_001277_090--Hb_011360_080 Hb_004785_140 Hb_004785_140 Hb_001277_090--Hb_004785_140 Hb_013818_060 Hb_013818_060 Hb_004460_010--Hb_013818_060 Hb_001799_080 Hb_001799_080 Hb_004460_010--Hb_001799_080 Hb_000120_120 Hb_000120_120 Hb_004460_010--Hb_000120_120 Hb_004460_010--Hb_011360_080 Hb_004460_010--Hb_003599_070 Hb_004460_010--Hb_000477_080 Hb_000161_150 Hb_000161_150 Hb_009314_010--Hb_000161_150 Hb_000432_050 Hb_000432_050 Hb_009314_010--Hb_000432_050 Hb_006816_450 Hb_006816_450 Hb_009314_010--Hb_006816_450 Hb_002756_020 Hb_002756_020 Hb_009314_010--Hb_002756_020 Hb_005224_010 Hb_005224_010 Hb_009314_010--Hb_005224_010 Hb_000771_130 Hb_000771_130 Hb_009314_010--Hb_000771_130 Hb_005188_090 Hb_005188_090 Hb_000094_130--Hb_005188_090 Hb_000094_130--Hb_000327_220 Hb_004410_100 Hb_004410_100 Hb_000094_130--Hb_004410_100 Hb_000236_140 Hb_000236_140 Hb_000094_130--Hb_000236_140 Hb_005043_010 Hb_005043_010 Hb_000094_130--Hb_005043_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.50504 9.8049 4.60309 5.40026 8.8982 0.568288
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.4601 11.8425 95.9375 9.41341 0.302359

CAGE analysis