Hb_000943_060

Information

Type -
Description -
Location Contig943: 73715-74515
Sequence    

Annotation

kegg
ID pop:POPTR_0006s18380g
description hypothetical protein
nr
ID XP_012074057.1
description PREDICTED: uncharacterized protein LOC105635589 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KX15
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08668 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000943_060 0.0 - - PREDICTED: uncharacterized protein LOC105635589 [Jatropha curcas]
2 Hb_091889_010 0.1979257748 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_011628_020 0.2027313675 - - conserved hypothetical protein [Ricinus communis]
4 Hb_010506_010 0.237601077 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
5 Hb_001477_150 0.248071058 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_026687_010 0.2569631685 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Eucalyptus grandis]
7 Hb_002217_460 0.2655550901 - - PREDICTED: transcription factor bHLH147-like [Jatropha curcas]
8 Hb_005321_010 0.2694994087 - - PREDICTED: uncharacterized protein LOC105644542 [Jatropha curcas]
9 Hb_012052_070 0.26956616 - - PREDICTED: uncharacterized protein LOC105635597 [Jatropha curcas]
10 Hb_002784_100 0.2769186607 - - PREDICTED: uncharacterized protein LOC105631246 [Jatropha curcas]
11 Hb_000130_230 0.2780270522 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098-like [Jatropha curcas]
12 Hb_000120_150 0.28029405 - - hypothetical protein JCGZ_08453 [Jatropha curcas]
13 Hb_005048_060 0.2804410283 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003891_090 0.282424831 - - -
15 Hb_033834_050 0.2829275002 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000656_410 0.2834178356 - - hypothetical protein POPTR_0003s06410g [Populus trichocarpa]
17 Hb_001488_370 0.2834267779 - - Esterase PIR7B, putative [Ricinus communis]
18 Hb_000099_070 0.2864068168 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
19 Hb_003777_360 0.2871576141 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
20 Hb_001164_030 0.2873101634 - - GMP synthase [glutamine-hydrolyzing] subunit A, putative [Ricinus communis]

Gene co-expression network

sample Hb_000943_060 Hb_000943_060 Hb_091889_010 Hb_091889_010 Hb_000943_060--Hb_091889_010 Hb_011628_020 Hb_011628_020 Hb_000943_060--Hb_011628_020 Hb_010506_010 Hb_010506_010 Hb_000943_060--Hb_010506_010 Hb_001477_150 Hb_001477_150 Hb_000943_060--Hb_001477_150 Hb_026687_010 Hb_026687_010 Hb_000943_060--Hb_026687_010 Hb_002217_460 Hb_002217_460 Hb_000943_060--Hb_002217_460 Hb_091889_010--Hb_010506_010 Hb_000120_150 Hb_000120_150 Hb_091889_010--Hb_000120_150 Hb_001164_030 Hb_001164_030 Hb_091889_010--Hb_001164_030 Hb_091889_010--Hb_002217_460 Hb_091889_010--Hb_011628_020 Hb_033834_050 Hb_033834_050 Hb_011628_020--Hb_033834_050 Hb_042871_010 Hb_042871_010 Hb_011628_020--Hb_042871_010 Hb_002784_100 Hb_002784_100 Hb_011628_020--Hb_002784_100 Hb_003891_080 Hb_003891_080 Hb_011628_020--Hb_003891_080 Hb_010506_010--Hb_000120_150 Hb_140049_010 Hb_140049_010 Hb_010506_010--Hb_140049_010 Hb_004787_040 Hb_004787_040 Hb_010506_010--Hb_004787_040 Hb_010506_010--Hb_001164_030 Hb_005162_100 Hb_005162_100 Hb_010506_010--Hb_005162_100 Hb_008438_010 Hb_008438_010 Hb_001477_150--Hb_008438_010 Hb_003020_170 Hb_003020_170 Hb_001477_150--Hb_003020_170 Hb_001951_250 Hb_001951_250 Hb_001477_150--Hb_001951_250 Hb_000130_230 Hb_000130_230 Hb_001477_150--Hb_000130_230 Hb_002046_070 Hb_002046_070 Hb_001477_150--Hb_002046_070 Hb_003847_020 Hb_003847_020 Hb_026687_010--Hb_003847_020 Hb_003398_140 Hb_003398_140 Hb_026687_010--Hb_003398_140 Hb_028271_020 Hb_028271_020 Hb_026687_010--Hb_028271_020 Hb_000099_070 Hb_000099_070 Hb_026687_010--Hb_000099_070 Hb_003992_080 Hb_003992_080 Hb_026687_010--Hb_003992_080 Hb_000094_110 Hb_000094_110 Hb_026687_010--Hb_000094_110 Hb_000002_260 Hb_000002_260 Hb_002217_460--Hb_000002_260 Hb_002217_460--Hb_000099_070 Hb_005321_010 Hb_005321_010 Hb_002217_460--Hb_005321_010 Hb_001016_080 Hb_001016_080 Hb_002217_460--Hb_001016_080 Hb_001449_100 Hb_001449_100 Hb_002217_460--Hb_001449_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0367939 3.33967 0.0921388 1.49598 0.109868 0.0776808
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.269498 7.99946 2.77936 0.450281 0.212714

CAGE analysis