Hb_000099_070

Information

Type -
Description -
Location Contig99: 77012-81986
Sequence    

Annotation

kegg
ID rcu:RCOM_1689760
description hypothetical protein
nr
ID XP_012086786.1
description PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
swissprot
ID Q66GQ2
description Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=2 SV=2
trembl
ID A0A067JZB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20506 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64719: 77259-78487 , PASA_asmbl_64720: 78603-78721 , PASA_asmbl_64721: 78734-81754
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000099_070 0.0 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
2 Hb_000116_040 0.1416639706 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
3 Hb_008772_010 0.1494338726 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006006_050 0.1517468558 - - PREDICTED: methylthioribose kinase-like [Gossypium raimondii]
5 Hb_002235_080 0.1531086861 - - PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis vinifera]
6 Hb_007017_010 0.1581967014 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
7 Hb_011236_010 0.1585241407 - - hypothetical protein JCGZ_17006 [Jatropha curcas]
8 Hb_000788_010 0.1618956091 - - 40S ribosomal protein S16A [Hevea brasiliensis]
9 Hb_003929_150 0.1635906278 - - PREDICTED: rRNA-processing protein fcf2-like [Jatropha curcas]
10 Hb_002217_460 0.1682995324 - - PREDICTED: transcription factor bHLH147-like [Jatropha curcas]
11 Hb_003038_190 0.1737943275 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105645961 [Jatropha curcas]
12 Hb_007245_080 0.1740278538 - - PREDICTED: uncharacterized protein LOC105644587 [Jatropha curcas]
13 Hb_006615_080 0.1740386129 - - PREDICTED: uncharacterized protein LOC105640684 isoform X2 [Jatropha curcas]
14 Hb_000487_230 0.1782928413 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
15 Hb_001565_080 0.1783648755 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Jatropha curcas]
16 Hb_002231_030 0.1803996122 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
17 Hb_000028_100 0.1818339663 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL61 [Jatropha curcas]
18 Hb_001269_490 0.1822122877 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000649_130 0.1823679988 - - Polcalcin Jun o, putative [Ricinus communis]
20 Hb_028271_020 0.1834572968 - - acyl-CoA oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000099_070 Hb_000099_070 Hb_000116_040 Hb_000116_040 Hb_000099_070--Hb_000116_040 Hb_008772_010 Hb_008772_010 Hb_000099_070--Hb_008772_010 Hb_006006_050 Hb_006006_050 Hb_000099_070--Hb_006006_050 Hb_002235_080 Hb_002235_080 Hb_000099_070--Hb_002235_080 Hb_007017_010 Hb_007017_010 Hb_000099_070--Hb_007017_010 Hb_011236_010 Hb_011236_010 Hb_000099_070--Hb_011236_010 Hb_000377_120 Hb_000377_120 Hb_000116_040--Hb_000377_120 Hb_027684_020 Hb_027684_020 Hb_000116_040--Hb_027684_020 Hb_001269_490 Hb_001269_490 Hb_000116_040--Hb_001269_490 Hb_000116_040--Hb_008772_010 Hb_001410_060 Hb_001410_060 Hb_000116_040--Hb_001410_060 Hb_000136_350 Hb_000136_350 Hb_000116_040--Hb_000136_350 Hb_006478_160 Hb_006478_160 Hb_008772_010--Hb_006478_160 Hb_150196_010 Hb_150196_010 Hb_008772_010--Hb_150196_010 Hb_012760_070 Hb_012760_070 Hb_008772_010--Hb_012760_070 Hb_000215_060 Hb_000215_060 Hb_008772_010--Hb_000215_060 Hb_000115_230 Hb_000115_230 Hb_008772_010--Hb_000115_230 Hb_000450_130 Hb_000450_130 Hb_008772_010--Hb_000450_130 Hb_001369_170 Hb_001369_170 Hb_006006_050--Hb_001369_170 Hb_000788_010 Hb_000788_010 Hb_006006_050--Hb_000788_010 Hb_000997_190 Hb_000997_190 Hb_006006_050--Hb_000997_190 Hb_001225_010 Hb_001225_010 Hb_006006_050--Hb_001225_010 Hb_000282_070 Hb_000282_070 Hb_006006_050--Hb_000282_070 Hb_006006_050--Hb_008772_010 Hb_003929_150 Hb_003929_150 Hb_002235_080--Hb_003929_150 Hb_007245_080 Hb_007245_080 Hb_002235_080--Hb_007245_080 Hb_002235_080--Hb_006478_160 Hb_000093_110 Hb_000093_110 Hb_002235_080--Hb_000093_110 Hb_002235_080--Hb_000788_010 Hb_008921_020 Hb_008921_020 Hb_002235_080--Hb_008921_020 Hb_007017_010--Hb_002235_080 Hb_003327_050 Hb_003327_050 Hb_007017_010--Hb_003327_050 Hb_000028_100 Hb_000028_100 Hb_007017_010--Hb_000028_100 Hb_000487_230 Hb_000487_230 Hb_007017_010--Hb_000487_230 Hb_183612_060 Hb_183612_060 Hb_007017_010--Hb_183612_060 Hb_004223_040 Hb_004223_040 Hb_011236_010--Hb_004223_040 Hb_011236_010--Hb_003929_150 Hb_000699_090 Hb_000699_090 Hb_011236_010--Hb_000699_090 Hb_011236_010--Hb_006478_160 Hb_001718_030 Hb_001718_030 Hb_011236_010--Hb_001718_030 Hb_000676_310 Hb_000676_310 Hb_011236_010--Hb_000676_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.94367 11.0272 3.62405 11.3983 3.38563 4.32044
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.46519 40.6711 10.6872 9.64308 3.54148

CAGE analysis