Hb_001488_370

Information

Type -
Description -
Location Contig1488: 302316-313969
Sequence    

Annotation

kegg
ID rcu:RCOM_0049010
description Esterase PIR7B, putative (EC:3.1.1.78)
nr
ID XP_002533543.1
description Esterase PIR7B, putative [Ricinus communis]
swissprot
ID Q9FW03
description Putative methylesterase 11, chloroplastic OS=Arabidopsis thaliana GN=MES11 PE=2 SV=1
trembl
ID B9T5M4
description Esterase PIR7B, putative OS=Ricinus communis GN=RCOM_0049010 PE=4 SV=1
Gene Ontology
ID GO:0050529
description methylesterase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12339: 302691-313859
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001488_370 0.0 - - Esterase PIR7B, putative [Ricinus communis]
2 Hb_012545_050 0.114583572 - - PREDICTED: serine carboxypeptidase II-3-like [Jatropha curcas]
3 Hb_012053_050 0.1357168549 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
4 Hb_001369_600 0.1439966988 - - kinase, putative [Ricinus communis]
5 Hb_000997_190 0.1459494729 - - PREDICTED: magnesium transporter MRS2-I-like [Jatropha curcas]
6 Hb_001437_130 0.1467155205 - - hypothetical protein F383_15788 [Gossypium arboreum]
7 Hb_001776_170 0.1591434602 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002067_140 0.1600425112 - - -
9 Hb_003540_200 0.163564375 - - PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Jatropha curcas]
10 Hb_012053_010 0.1636191061 - - srpk, putative [Ricinus communis]
11 Hb_000979_250 0.1646401843 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000239_030 0.176267558 - - PREDICTED: mitochondrial outer membrane protein porin 2-like [Jatropha curcas]
13 Hb_001369_450 0.17636494 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
14 Hb_138455_010 0.1785657757 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_000373_180 0.1832847627 transcription factor TF Family: Trihelix hypothetical protein JCGZ_25182 [Jatropha curcas]
16 Hb_001511_140 0.1838318757 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
17 Hb_000110_170 0.1842901132 - - PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_146225_010 0.1843316608 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
19 Hb_000878_020 0.1843699331 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]
20 Hb_028271_020 0.1861098327 - - acyl-CoA oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001488_370 Hb_001488_370 Hb_012545_050 Hb_012545_050 Hb_001488_370--Hb_012545_050 Hb_012053_050 Hb_012053_050 Hb_001488_370--Hb_012053_050 Hb_001369_600 Hb_001369_600 Hb_001488_370--Hb_001369_600 Hb_000997_190 Hb_000997_190 Hb_001488_370--Hb_000997_190 Hb_001437_130 Hb_001437_130 Hb_001488_370--Hb_001437_130 Hb_001776_170 Hb_001776_170 Hb_001488_370--Hb_001776_170 Hb_000264_020 Hb_000264_020 Hb_012545_050--Hb_000264_020 Hb_012545_050--Hb_001437_130 Hb_000373_180 Hb_000373_180 Hb_012545_050--Hb_000373_180 Hb_000392_380 Hb_000392_380 Hb_012545_050--Hb_000392_380 Hb_000239_030 Hb_000239_030 Hb_012545_050--Hb_000239_030 Hb_012053_050--Hb_001369_600 Hb_012053_050--Hb_001776_170 Hb_000589_160 Hb_000589_160 Hb_012053_050--Hb_000589_160 Hb_012053_050--Hb_000373_180 Hb_002759_240 Hb_002759_240 Hb_012053_050--Hb_002759_240 Hb_002067_140 Hb_002067_140 Hb_001369_600--Hb_002067_140 Hb_001369_600--Hb_001776_170 Hb_007426_050 Hb_007426_050 Hb_001369_600--Hb_007426_050 Hb_001369_600--Hb_000589_160 Hb_001172_120 Hb_001172_120 Hb_000997_190--Hb_001172_120 Hb_006006_050 Hb_006006_050 Hb_000997_190--Hb_006006_050 Hb_001235_110 Hb_001235_110 Hb_000997_190--Hb_001235_110 Hb_006478_160 Hb_006478_160 Hb_000997_190--Hb_006478_160 Hb_000567_410 Hb_000567_410 Hb_000997_190--Hb_000567_410 Hb_002231_030 Hb_002231_030 Hb_000997_190--Hb_002231_030 Hb_000009_450 Hb_000009_450 Hb_001437_130--Hb_000009_450 Hb_003777_050 Hb_003777_050 Hb_001437_130--Hb_003777_050 Hb_000110_320 Hb_000110_320 Hb_001437_130--Hb_000110_320 Hb_001437_130--Hb_001235_110 Hb_001776_170--Hb_002067_140 Hb_001511_140 Hb_001511_140 Hb_001776_170--Hb_001511_140 Hb_001776_170--Hb_002759_240 Hb_000979_250 Hb_000979_250 Hb_001776_170--Hb_000979_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.634 9.20457 5.77499 6.50121 1.09195 2.46092
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.2383 54.1777 30.8571 5.69402 2.03838

CAGE analysis