Hb_007757_140

Information

Type -
Description -
Location Contig7757: 95295-100682
Sequence    

Annotation

kegg
ID pda:103723366
description uncharacterized LOC103723366
nr
ID XP_009764284.1
description PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID Q8RU68
description Putative 22 kDa kafirin cluster; Ty3-Gypsy type OS=Oryza sativa GN=OSJNBa0022D10.4 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007757_140 0.0 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
2 Hb_000892_070 0.2611748139 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]
3 Hb_006586_010 0.2949918171 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_008438_010 0.3122574533 - - PREDICTED: uncharacterized protein LOC104245771 [Nicotiana sylvestris]
5 Hb_001477_150 0.3193887481 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_080749_010 0.330893717 - - PREDICTED: putative DNA-binding protein ESCAROLA [Populus euphratica]
7 Hb_001951_250 0.3423993937 - - -
8 Hb_004699_020 0.355334672 - - PREDICTED: uncharacterized protein LOC103410170 [Malus domestica]
9 Hb_008505_020 0.3638353123 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
10 Hb_033835_020 0.3638378452 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_005531_010 0.3639281654 - - hypothetical protein CICLE_v10033008mg [Citrus clementina]
12 Hb_001741_130 0.3642441843 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]
13 Hb_163268_010 0.3642514893 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
14 Hb_002240_040 0.3653529688 - - -
15 Hb_000130_230 0.366314309 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098-like [Jatropha curcas]
16 Hb_000756_020 0.3675644903 - - BnaA05g19440D [Brassica napus]
17 Hb_039229_010 0.3807861166 - - -
18 Hb_000061_280 0.3840114722 - - PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Jatropha curcas]
19 Hb_150851_010 0.3867919577 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_008835_010 0.3891465243 - - PREDICTED: uncharacterized protein LOC105851721 [Cicer arietinum]

Gene co-expression network

sample Hb_007757_140 Hb_007757_140 Hb_000892_070 Hb_000892_070 Hb_007757_140--Hb_000892_070 Hb_006586_010 Hb_006586_010 Hb_007757_140--Hb_006586_010 Hb_008438_010 Hb_008438_010 Hb_007757_140--Hb_008438_010 Hb_001477_150 Hb_001477_150 Hb_007757_140--Hb_001477_150 Hb_080749_010 Hb_080749_010 Hb_007757_140--Hb_080749_010 Hb_001951_250 Hb_001951_250 Hb_007757_140--Hb_001951_250 Hb_002725_060 Hb_002725_060 Hb_000892_070--Hb_002725_060 Hb_004994_110 Hb_004994_110 Hb_000892_070--Hb_004994_110 Hb_167711_040 Hb_167711_040 Hb_000892_070--Hb_167711_040 Hb_000130_230 Hb_000130_230 Hb_000892_070--Hb_000130_230 Hb_000892_070--Hb_001951_250 Hb_000368_080 Hb_000368_080 Hb_006586_010--Hb_000368_080 Hb_001966_010 Hb_001966_010 Hb_006586_010--Hb_001966_010 Hb_004195_250 Hb_004195_250 Hb_006586_010--Hb_004195_250 Hb_001190_090 Hb_001190_090 Hb_006586_010--Hb_001190_090 Hb_002118_040 Hb_002118_040 Hb_006586_010--Hb_002118_040 Hb_007157_030 Hb_007157_030 Hb_008438_010--Hb_007157_030 Hb_008438_010--Hb_001477_150 Hb_012371_010 Hb_012371_010 Hb_008438_010--Hb_012371_010 Hb_002660_060 Hb_002660_060 Hb_008438_010--Hb_002660_060 Hb_002046_070 Hb_002046_070 Hb_008438_010--Hb_002046_070 Hb_003055_170 Hb_003055_170 Hb_008438_010--Hb_003055_170 Hb_003020_170 Hb_003020_170 Hb_001477_150--Hb_003020_170 Hb_000943_060 Hb_000943_060 Hb_001477_150--Hb_000943_060 Hb_001477_150--Hb_001951_250 Hb_001477_150--Hb_000130_230 Hb_001477_150--Hb_002046_070 Hb_080749_010--Hb_003020_170 Hb_011249_040 Hb_011249_040 Hb_080749_010--Hb_011249_040 Hb_003055_150 Hb_003055_150 Hb_080749_010--Hb_003055_150 Hb_080749_010--Hb_001477_150 Hb_012338_020 Hb_012338_020 Hb_080749_010--Hb_012338_020 Hb_000321_130 Hb_000321_130 Hb_080749_010--Hb_000321_130 Hb_001951_250--Hb_000130_230 Hb_000371_070 Hb_000371_070 Hb_001951_250--Hb_000371_070 Hb_003777_360 Hb_003777_360 Hb_001951_250--Hb_003777_360 Hb_007426_050 Hb_007426_050 Hb_001951_250--Hb_007426_050 Hb_002067_140 Hb_002067_140 Hb_001951_250--Hb_002067_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0123509 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0133859 0.0255366 0 0

CAGE analysis