Hb_007885_050

Information

Type -
Description -
Location Contig7885: 53562-55033
Sequence    

Annotation

kegg
ID rcu:RCOM_1685300
description Lignin-forming anionic peroxidase precursor, putative (EC:1.11.1.7)
nr
ID XP_012086980.1
description PREDICTED: lignin-forming anionic peroxidase-like [Jatropha curcas]
swissprot
ID A7NY33
description Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1
trembl
ID A0A067JZQ2
description Peroxidase OS=Jatropha curcas GN=JCGZ_20646 PE=3 SV=1
Gene Ontology
ID GO:0005576
description lignin-forming anionic peroxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007885_050 0.0 - - PREDICTED: lignin-forming anionic peroxidase-like [Jatropha curcas]
2 Hb_000836_490 0.1429611715 - - PREDICTED: E3 SUMO-protein ligase pli1-like [Jatropha curcas]
3 Hb_000117_100 0.2054410335 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000594_090 0.2131747693 - - PREDICTED: allene oxide cyclase 3, chloroplastic-like [Populus euphratica]
5 Hb_026527_020 0.2203623044 - - PREDICTED: putative methyltransferase DDB_G0268948 [Jatropha curcas]
6 Hb_008725_040 0.2322958804 - - PREDICTED: uncharacterized protein At4g29660 [Nelumbo nucifera]
7 Hb_006538_190 0.2427069442 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
8 Hb_003777_360 0.2469402619 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
9 Hb_014497_080 0.2474427581 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
10 Hb_162275_020 0.2537213877 - - phosphate transporter [Manihot esculenta]
11 Hb_000732_210 0.2590414692 - - hexose transporter 1 [Hevea brasiliensis]
12 Hb_000062_300 0.2605036466 - - PREDICTED: uncharacterized protein LOC105644761 [Jatropha curcas]
13 Hb_004208_130 0.2624303821 - - hypothetical protein JCGZ_16532 [Jatropha curcas]
14 Hb_028271_020 0.2640093373 - - acyl-CoA oxidase, putative [Ricinus communis]
15 Hb_017170_030 0.2661101655 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
16 Hb_003398_020 0.26644029 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
17 Hb_002284_190 0.2751118619 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
18 Hb_002774_110 0.2765209099 - - heat shock protein binding protein, putative [Ricinus communis]
19 Hb_000297_020 0.2798735571 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
20 Hb_170426_010 0.2800327319 - - cytochrome b5 isoform Cb5-B [Vernicia fordii]

Gene co-expression network

sample Hb_007885_050 Hb_007885_050 Hb_000836_490 Hb_000836_490 Hb_007885_050--Hb_000836_490 Hb_000117_100 Hb_000117_100 Hb_007885_050--Hb_000117_100 Hb_000594_090 Hb_000594_090 Hb_007885_050--Hb_000594_090 Hb_026527_020 Hb_026527_020 Hb_007885_050--Hb_026527_020 Hb_008725_040 Hb_008725_040 Hb_007885_050--Hb_008725_040 Hb_006538_190 Hb_006538_190 Hb_007885_050--Hb_006538_190 Hb_003777_360 Hb_003777_360 Hb_000836_490--Hb_003777_360 Hb_000836_490--Hb_000594_090 Hb_004208_130 Hb_004208_130 Hb_000836_490--Hb_004208_130 Hb_028271_020 Hb_028271_020 Hb_000836_490--Hb_028271_020 Hb_000836_490--Hb_000117_100 Hb_000117_100--Hb_003777_360 Hb_000732_210 Hb_000732_210 Hb_000117_100--Hb_000732_210 Hb_009974_020 Hb_009974_020 Hb_000117_100--Hb_009974_020 Hb_004787_040 Hb_004787_040 Hb_000117_100--Hb_004787_040 Hb_029879_090 Hb_029879_090 Hb_000594_090--Hb_029879_090 Hb_038134_010 Hb_038134_010 Hb_000594_090--Hb_038134_010 Hb_000563_260 Hb_000563_260 Hb_000594_090--Hb_000563_260 Hb_000594_090--Hb_008725_040 Hb_006420_090 Hb_006420_090 Hb_026527_020--Hb_006420_090 Hb_001268_130 Hb_001268_130 Hb_026527_020--Hb_001268_130 Hb_011016_010 Hb_011016_010 Hb_026527_020--Hb_011016_010 Hb_026527_020--Hb_000836_490 Hb_003038_170 Hb_003038_170 Hb_026527_020--Hb_003038_170 Hb_010883_070 Hb_010883_070 Hb_008725_040--Hb_010883_070 Hb_103118_020 Hb_103118_020 Hb_008725_040--Hb_103118_020 Hb_003913_080 Hb_003913_080 Hb_008725_040--Hb_003913_080 Hb_116420_020 Hb_116420_020 Hb_008725_040--Hb_116420_020 Hb_008725_040--Hb_004208_130 Hb_008725_040--Hb_000732_210 Hb_017170_030 Hb_017170_030 Hb_006538_190--Hb_017170_030 Hb_000614_170 Hb_000614_170 Hb_006538_190--Hb_000614_170 Hb_162275_020 Hb_162275_020 Hb_006538_190--Hb_162275_020 Hb_001699_200 Hb_001699_200 Hb_006538_190--Hb_001699_200 Hb_007153_040 Hb_007153_040 Hb_006538_190--Hb_007153_040 Hb_000317_420 Hb_000317_420 Hb_006538_190--Hb_000317_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0521937 0.174096 0.333927 0 0.0182008
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.159109 1.75223 0.582562 1.09016 0.064815

CAGE analysis