Hb_007153_040

Information

Type -
Description -
Location Contig7153: 23055-27863
Sequence    

Annotation

kegg
ID pop:POPTR_0006s19790g
description POPTRDRAFT_819372; hypothetical protein
nr
ID XP_012071508.1
description PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2H8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04033 PE=4 SV=1
Gene Ontology
ID GO:0005886
description dnase i-like superfamily protein isoform 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007153_040 0.0 - - PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
2 Hb_004064_010 0.1453646561 - - PREDICTED: uncharacterized protein LOC105133340 isoform X1 [Populus euphratica]
3 Hb_000297_020 0.1524143344 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
4 Hb_105602_010 0.1658446057 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
5 Hb_017170_030 0.1704456601 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
6 Hb_000320_300 0.1771765869 - - prephenate dehydratase, putative [Ricinus communis]
7 Hb_003266_100 0.1853079501 - - Isomerase protein [Gossypium arboreum]
8 Hb_002374_380 0.1862541412 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
9 Hb_000614_170 0.1872346798 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
10 Hb_006538_190 0.1888210516 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
11 Hb_000621_020 0.18987303 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
12 Hb_138710_010 0.1899343477 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
13 Hb_001341_100 0.1907584964 - - hypothetical protein JCGZ_05568 [Jatropha curcas]
14 Hb_001486_030 0.1935417114 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004079_080 0.1943811961 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
16 Hb_001623_160 0.1951019983 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
17 Hb_000694_060 0.1987976971 - - Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative [Ricinus communis]
18 Hb_005873_010 0.2004271318 - - cysteine desulfurylase, putative [Ricinus communis]
19 Hb_002291_010 0.2021587825 - - ring finger protein, putative [Ricinus communis]
20 Hb_001140_360 0.203363344 - - -

Gene co-expression network

sample Hb_007153_040 Hb_007153_040 Hb_004064_010 Hb_004064_010 Hb_007153_040--Hb_004064_010 Hb_000297_020 Hb_000297_020 Hb_007153_040--Hb_000297_020 Hb_105602_010 Hb_105602_010 Hb_007153_040--Hb_105602_010 Hb_017170_030 Hb_017170_030 Hb_007153_040--Hb_017170_030 Hb_000320_300 Hb_000320_300 Hb_007153_040--Hb_000320_300 Hb_003266_100 Hb_003266_100 Hb_007153_040--Hb_003266_100 Hb_004064_010--Hb_003266_100 Hb_004064_010--Hb_105602_010 Hb_000621_020 Hb_000621_020 Hb_004064_010--Hb_000621_020 Hb_109002_020 Hb_109002_020 Hb_004064_010--Hb_109002_020 Hb_001341_100 Hb_001341_100 Hb_004064_010--Hb_001341_100 Hb_001486_030 Hb_001486_030 Hb_004064_010--Hb_001486_030 Hb_000297_020--Hb_017170_030 Hb_000297_020--Hb_105602_010 Hb_004208_130 Hb_004208_130 Hb_000297_020--Hb_004208_130 Hb_162275_020 Hb_162275_020 Hb_000297_020--Hb_162275_020 Hb_000614_170 Hb_000614_170 Hb_000297_020--Hb_000614_170 Hb_009687_010 Hb_009687_010 Hb_105602_010--Hb_009687_010 Hb_105602_010--Hb_000621_020 Hb_105602_010--Hb_003266_100 Hb_001332_040 Hb_001332_040 Hb_105602_010--Hb_001332_040 Hb_000103_270 Hb_000103_270 Hb_105602_010--Hb_000103_270 Hb_006538_190 Hb_006538_190 Hb_017170_030--Hb_006538_190 Hb_017170_030--Hb_162275_020 Hb_017170_030--Hb_000614_170 Hb_000723_170 Hb_000723_170 Hb_017170_030--Hb_000723_170 Hb_000120_720 Hb_000120_720 Hb_000320_300--Hb_000120_720 Hb_001946_220 Hb_001946_220 Hb_000320_300--Hb_001946_220 Hb_001699_200 Hb_001699_200 Hb_000320_300--Hb_001699_200 Hb_000320_300--Hb_000614_170 Hb_004005_020 Hb_004005_020 Hb_000320_300--Hb_004005_020 Hb_000320_300--Hb_003266_100 Hb_003266_100--Hb_000621_020 Hb_016522_010 Hb_016522_010 Hb_003266_100--Hb_016522_010 Hb_000483_260 Hb_000483_260 Hb_003266_100--Hb_000483_260 Hb_003266_100--Hb_109002_020 Hb_000665_050 Hb_000665_050 Hb_003266_100--Hb_000665_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.412928 2.47295 2.13907 2.12415 0.541862 0.483874
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.33415 4.82806 3.54148 7.98747 0.602348

CAGE analysis