Hb_029584_090

Information

Type -
Description -
Location Contig29584: 42657-47258
Sequence    

Annotation

kegg
ID rcu:RCOM_1047800
description ATP binding protein, putative
nr
ID XP_012076895.1
description PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
swissprot
ID Q9SX31
description Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1
trembl
ID A0A067KPT1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07385 PE=4 SV=1
Gene Ontology
ID GO:0004672
description inactive protein kinase selmodraft_444075

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30922: 42601-47239 , PASA_asmbl_30923: 45338-47154
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029584_090 0.0 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
2 Hb_000963_200 0.1191382423 - - beta-galactosidase, putative [Ricinus communis]
3 Hb_004495_020 0.1260357628 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
4 Hb_001341_200 0.1279642766 transcription factor TF Family: ARF PREDICTED: auxin response factor 4 [Jatropha curcas]
5 Hb_032631_050 0.1420117535 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
6 Hb_000421_270 0.1462963241 transcription factor TF Family: LOB LOB domain-containing protein 1 [Theobroma cacao]
7 Hb_002025_350 0.1475225348 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
8 Hb_004657_040 0.1507925263 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
9 Hb_002662_090 0.1529586466 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
10 Hb_004195_090 0.1604021997 - - PREDICTED: probable mitochondrial chaperone bcs1 [Jatropha curcas]
11 Hb_011200_020 0.1649224735 - - aldo-keto reductase, putative [Ricinus communis]
12 Hb_005181_180 0.1655820887 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000005_340 0.1660758257 - - PREDICTED: uncharacterized protein LOC105634028 isoform X1 [Jatropha curcas]
14 Hb_000853_060 0.1673564115 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
15 Hb_000227_370 0.1689621628 - - sugar transporter, putative [Ricinus communis]
16 Hb_000527_140 0.1693652075 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
17 Hb_029622_020 0.1700902489 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000181_160 0.171031394 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
19 Hb_010174_190 0.1710991715 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
20 Hb_003453_030 0.1733699929 - - hypothetical protein JCGZ_26893 [Jatropha curcas]

Gene co-expression network

sample Hb_029584_090 Hb_029584_090 Hb_000963_200 Hb_000963_200 Hb_029584_090--Hb_000963_200 Hb_004495_020 Hb_004495_020 Hb_029584_090--Hb_004495_020 Hb_001341_200 Hb_001341_200 Hb_029584_090--Hb_001341_200 Hb_032631_050 Hb_032631_050 Hb_029584_090--Hb_032631_050 Hb_000421_270 Hb_000421_270 Hb_029584_090--Hb_000421_270 Hb_002025_350 Hb_002025_350 Hb_029584_090--Hb_002025_350 Hb_000034_030 Hb_000034_030 Hb_000963_200--Hb_000034_030 Hb_006594_060 Hb_006594_060 Hb_000963_200--Hb_006594_060 Hb_000963_200--Hb_032631_050 Hb_003453_030 Hb_003453_030 Hb_000963_200--Hb_003453_030 Hb_011200_020 Hb_011200_020 Hb_000963_200--Hb_011200_020 Hb_004495_020--Hb_001341_200 Hb_000139_140 Hb_000139_140 Hb_004495_020--Hb_000139_140 Hb_003607_060 Hb_003607_060 Hb_004495_020--Hb_003607_060 Hb_005181_180 Hb_005181_180 Hb_004495_020--Hb_005181_180 Hb_002026_080 Hb_002026_080 Hb_004495_020--Hb_002026_080 Hb_009646_010 Hb_009646_010 Hb_001341_200--Hb_009646_010 Hb_001341_200--Hb_005181_180 Hb_004195_090 Hb_004195_090 Hb_001341_200--Hb_004195_090 Hb_001341_200--Hb_000139_140 Hb_032631_050--Hb_000421_270 Hb_001348_210 Hb_001348_210 Hb_032631_050--Hb_001348_210 Hb_032631_050--Hb_011200_020 Hb_032631_050--Hb_002025_350 Hb_000421_270--Hb_002025_350 Hb_000116_590 Hb_000116_590 Hb_000421_270--Hb_000116_590 Hb_000421_270--Hb_011200_020 Hb_000421_270--Hb_000963_200 Hb_000227_370 Hb_000227_370 Hb_002025_350--Hb_000227_370 Hb_000005_230 Hb_000005_230 Hb_002025_350--Hb_000005_230 Hb_001405_150 Hb_001405_150 Hb_002025_350--Hb_001405_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.50735 10.4388 5.84097 7.31924 0.292266 0.270166
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.95563 1.34491 1.62927 17.8572 1.95451

CAGE analysis